Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 PDPK2P-202ENST00000562415 1191 ntBASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GDPD4Q6W3E5 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 AC124947.2-201ENST00000547118 1133 ntBASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 MIR3687-2-201ENST00000577708 61 ntBASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 MIR3687-1-201ENST00000614492 61 ntBASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.1■□□□□ 0.33
GDPD4Q6W3E5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 UPF3AP3-201ENST00000420996 769 ntBASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 AC074386.1-202ENST00000463561 864 ntBASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 DUX4L17-201ENST00000557360 1267 ntBASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 AC010327.4-202ENST00000591484 748 ntBASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 TOP3BP1-201ENST00000420768 1380 ntBASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 AL021920.2-201ENST00000624828 1351 ntBASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 AC092053.1-201ENST00000605787 1936 ntBASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.09■□□□□ 0.33
GDPD4Q6W3E5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms