Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 Z83851.2-201ENST00000609564 659 ntBASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 ZNF259P1-201ENST00000407656 1365 ntBASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 ACTG1P4-201ENST00000425123 1122 ntBASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 AC009947.1-201ENST00000444350 727 ntBASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 POLD2P1-201ENST00000511220 997 ntBASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFWD3Q6PCD5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 PTCHD3P3-201ENST00000403073 906 ntBASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 RPS15P9-201ENST00000494093 319 ntBASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 PCDH8P1-201ENST00000428983 2773 ntBASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFWD3Q6PCD5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.83■□□□□ 0.45
RFWD3Q6PCD5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFWD3Q6PCD5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFWD3Q6PCD5 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFWD3Q6PCD5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RFWD3Q6PCD5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
RFWD3Q6PCD5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFWD3Q6PCD5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RFWD3Q6PCD5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RFWD3Q6PCD5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFWD3Q6PCD5 AC108751.1-201ENST00000490852 363 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms