Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC004967.1-201ENST00000453589 447 ntBASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 AC092183.1-201ENST00000469884 875 ntBASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 AC134684.3-201ENST00000641758 218 ntBASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 AC074386.1-202ENST00000463561 864 ntBASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 AP001160.2-201ENST00000596071 487 ntBASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 ACTL9-202ENST00000612068 1252 ntBASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 AC079781.4-201ENST00000641908 219 ntBASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H3F3CQ6NXT2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 HTR5BP-201ENST00000430851 1154 ntBASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 AP006288.1-201ENST00000446065 395 ntBASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
H3F3CQ6NXT2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
H3F3CQ6NXT2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.77■□□□□ 0.12
H3F3CQ6NXT2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.77■□□□□ 0.12
H3F3CQ6NXT2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H3F3CQ6NXT2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
H3F3CQ6NXT2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H3F3CQ6NXT2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
H3F3CQ6NXT2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.77■□□□□ 0.12
H3F3CQ6NXT2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H3F3CQ6NXT2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
H3F3CQ6NXT2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H3F3CQ6NXT2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms