Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 AL031432.2-201ENST00000566714 459 ntBASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 AL928711.1-201ENST00000570165 459 ntBASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 AC068137.2-201ENST00000605408 478 ntBASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.98■□□□□ 0.63
SWSAP1Q6NVH7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 LINC02012-201ENST00000608206 1725 ntBASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 AP002472.1-201ENST00000577490 586 ntBASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 AP001160.2-201ENST00000596071 487 ntBASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 AC091812.2-201ENST00000619081 385 ntBASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 ELL2P1-201ENST00000413990 1906 ntBASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SWSAP1Q6NVH7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 AC092053.1-201ENST00000605787 1936 ntBASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 DNAJB3-202ENST00000449667 1266 ntBASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 AC092183.1-201ENST00000469884 875 ntBASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 DUX4L17-201ENST00000557360 1267 ntBASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 MIR4515-201ENST00000584082 81 ntBASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 AC079781.4-201ENST00000641908 219 ntBASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 AL645728.2-201ENST00000641974 660 ntBASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SWSAP1Q6NVH7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms