Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
TTC39BQ5VTQ0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 LINC00982-205ENST00000420957 435 ntBASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 AL590627.1-203ENST00000421194 1026 ntBASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 AC136632.2-201ENST00000512891 861 ntBASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 AL135999.2-201ENST00000622438 1686 ntBASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 AC116407.3-201ENST00000623905 1129 ntBASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.85■□□□□ 0.45
TTC39BQ5VTQ0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 IL9RP2-201ENST00000423948 1312 ntBASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 AC012640.2-201ENST00000561606 901 ntBASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 AL356488.2-201ENST00000602755 427 ntBASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 AC120114.3-201ENST00000611923 658 ntBASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.84■□□□□ 0.45
TTC39BQ5VTQ0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TTC39BQ5VTQ0 GPR89P-201ENST00000407924 1495 ntBASIC17.83■□□□□ 0.45
TTC39BQ5VTQ0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TTC39BQ5VTQ0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 AC073621.1-201ENST00000392730 636 ntBASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 AC092910.1-201ENST00000482027 1129 ntBASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 AL353135.1-201ENST00000606729 504 ntBASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 AC005593.1-201ENST00000624894 515 ntBASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
TTC39BQ5VTQ0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.82■□□□□ 0.44
TTC39BQ5VTQ0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms