Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK3Q00526 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK3Q00526 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK3Q00526 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK3Q00526 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.77■□□□□ 0.28
CDK3Q00526 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.77■□□□□ 0.28
CDK3Q00526 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK3Q00526 ALG1L5P-201ENST00000482043 771 ntBASIC16.77■□□□□ 0.28
CDK3Q00526 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.77■□□□□ 0.28
CDK3Q00526 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.77■□□□□ 0.28
CDK3Q00526 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.77■□□□□ 0.28
CDK3Q00526 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CDK3Q00526 AC124947.2-201ENST00000547118 1133 ntBASIC16.77■□□□□ 0.28
CDK3Q00526 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.77■□□□□ 0.28
CDK3Q00526 AC005412.3-201ENST00000580309 715 ntBASIC16.77■□□□□ 0.28
CDK3Q00526 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK3Q00526 AC055717.3-201ENST00000622967 595 ntBASIC16.77■□□□□ 0.28
CDK3Q00526 C20orf181-201ENST00000623918 480 ntBASIC16.77■□□□□ 0.28
CDK3Q00526 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK3Q00526 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK3Q00526 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK3Q00526 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CDK3Q00526 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK3Q00526 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.77■□□□□ 0.28
CDK3Q00526 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK3Q00526 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK3Q00526 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.77■□□□□ 0.27
CDK3Q00526 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK3Q00526 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDK3Q00526 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDK3Q00526 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK3Q00526 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDK3Q00526 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK3Q00526 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK3Q00526 TOP3BP1-201ENST00000420768 1380 ntBASIC16.77■□□□□ 0.27
CDK3Q00526 OR6D1P-202ENST00000641007 5290 ntBASIC16.76■□□□□ 0.27
CDK3Q00526 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CDK3Q00526 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK3Q00526 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK3Q00526 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK3Q00526 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK3Q00526 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK3Q00526 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK3Q00526 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK3Q00526 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK3Q00526 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK3Q00526 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDK3Q00526 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK3Q00526 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK3Q00526 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK3Q00526 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CDK3Q00526 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK3Q00526 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK3Q00526 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK3Q00526 AC068137.2-201ENST00000605408 478 ntBASIC16.76■□□□□ 0.27
CDK3Q00526 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK3Q00526 AL078644.1-201ENST00000609881 752 ntBASIC16.76■□□□□ 0.27
CDK3Q00526 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK3Q00526 AL645728.2-201ENST00000641974 660 ntBASIC16.76■□□□□ 0.27
CDK3Q00526 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK3Q00526 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDK3Q00526 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK3Q00526 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK3Q00526 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK3Q00526 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK3Q00526 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK3Q00526 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK3Q00526 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK3Q00526 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK3Q00526 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CDK3Q00526 FZD10-202ENST00000539839 3282 ntBASIC16.76■□□□□ 0.27
CDK3Q00526 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK3Q00526 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK3Q00526 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK3Q00526 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CDK3Q00526 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK3Q00526 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK3Q00526 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK3Q00526 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK3Q00526 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK3Q00526 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDK3Q00526 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK3Q00526 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK3Q00526 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK3Q00526 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK3Q00526 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK3Q00526 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK3Q00526 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK3Q00526 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK3Q00526 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK3Q00526 AC092053.1-201ENST00000605787 1936 ntBASIC16.75■□□□□ 0.27
CDK3Q00526 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK3Q00526 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK3Q00526 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK3Q00526 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.75■□□□□ 0.27
CDK3Q00526 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK3Q00526 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK3Q00526 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.75■□□□□ 0.27
CDK3Q00526 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.75■□□□□ 0.27
CDK3Q00526 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms