Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.69■□□□□ 0.1
CDC42P60953 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.69■□□□□ 0.1
CDC42P60953 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.69■□□□□ 0.1
CDC42P60953 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
CDC42P60953 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.69■□□□□ 0.1
CDC42P60953 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.69■□□□□ 0.1
CDC42P60953 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.69■□□□□ 0.1
CDC42P60953 GCSHP2-201ENST00000560971 527 ntBASIC15.69■□□□□ 0.1
CDC42P60953 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CDC42P60953 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.69■□□□□ 0.1
CDC42P60953 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CDC42P60953 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.69■□□□□ 0.1
CDC42P60953 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.69■□□□□ 0.1
CDC42P60953 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDC42P60953 NORAD-201ENST00000565493 5339 ntBASIC15.69■□□□□ 0.1
CDC42P60953 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDC42P60953 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.68■□□□□ 0.1
CDC42P60953 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
CDC42P60953 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CDC42P60953 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.68■□□□□ 0.1
CDC42P60953 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CDC42P60953 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.68■□□□□ 0.1
CDC42P60953 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDC42P60953 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.68■□□□□ 0.1
CDC42P60953 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.68■□□□□ 0.1
CDC42P60953 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.68■□□□□ 0.1
CDC42P60953 RASA4DP-201ENST00000460726 1199 ntBASIC15.68■□□□□ 0.1
CDC42P60953 AC068472.1-201ENST00000474589 881 ntBASIC15.68■□□□□ 0.1
CDC42P60953 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.68■□□□□ 0.1
CDC42P60953 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.68■□□□□ 0.1
CDC42P60953 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.68■□□□□ 0.1
CDC42P60953 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.68■□□□□ 0.1
CDC42P60953 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.68■□□□□ 0.1
CDC42P60953 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.68■□□□□ 0.1
CDC42P60953 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.68■□□□□ 0.1
CDC42P60953 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.68■□□□□ 0.1
CDC42P60953 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.68■□□□□ 0.1
CDC42P60953 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42P60953 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42P60953 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDC42P60953 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CDC42P60953 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42P60953 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42P60953 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42P60953 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42P60953 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42P60953 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42P60953 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42P60953 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42P60953 AC010460.3-201ENST00000511359 1579 ntBASIC15.67■□□□□ 0.1
CDC42P60953 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42P60953 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42P60953 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms