Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 RHOD-202ENST00000532559 538 ntTSL 3 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 AC012354.3-201ENST00000623734 483 ntBASIC12.88□□□□□ -0.35
HIST1H2BDP58876 AC013268.1-206ENST00000638368 961 ntBASIC12.88□□□□□ -0.35
HIST1H2BDP58876 AC112229.1-201ENST00000639295 961 ntBASIC12.88□□□□□ -0.35
HIST1H2BDP58876 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HIST1H2BDP58876 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 AC232323.1-201ENST00000540724 2099 ntBASIC12.87□□□□□ -0.35
HIST1H2BDP58876 REXO1L5P-201ENST00000622260 2098 ntBASIC12.87□□□□□ -0.35
HIST1H2BDP58876 OR2I1P-210ENST00000642037 4691 ntBASIC12.87□□□□□ -0.35
HIST1H2BDP58876 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 AC009299.2-201ENST00000482477 511 ntBASIC12.87□□□□□ -0.35
HIST1H2BDP58876 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 PRSS44-201ENST00000515154 1146 ntBASIC12.87□□□□□ -0.35
HIST1H2BDP58876 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 RGMA-211ENST00000557420 989 ntTSL 3 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 GALNS-213ENST00000569433 723 ntTSL 3 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 AC005829.2-201ENST00000571422 1056 ntBASIC12.87□□□□□ -0.35
HIST1H2BDP58876 TERF1P2-201ENST00000583350 1212 ntBASIC12.87□□□□□ -0.35
HIST1H2BDP58876 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST1H2BDP58876 AL024508.2-201ENST00000607749 1894 ntBASIC12.87□□□□□ -0.35
HIST1H2BDP58876 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H2BDP58876 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.86□□□□□ -0.35
HIST1H2BDP58876 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
HIST1H2BDP58876 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H2BDP58876 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H2BDP58876 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.86□□□□□ -0.35
HIST1H2BDP58876 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H2BDP58876 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.86□□□□□ -0.35
HIST1H2BDP58876 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
HIST1H2BDP58876 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms