Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN6P56747 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN6P56747 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CLDN6P56747 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN6P56747 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN6P56747 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN6P56747 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN6P56747 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN6P56747 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN6P56747 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN6P56747 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN6P56747 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLDN6P56747 FAM86C2P-203ENST00000528684 1004 ntBASIC16.39■□□□□ 0.21
CLDN6P56747 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CLDN6P56747 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CLDN6P56747 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN6P56747 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN6P56747 GNAS-203ENST00000306120 1878 ntBASIC16.39■□□□□ 0.21
CLDN6P56747 AL354751.1-201ENST00000412768 1863 ntBASIC16.39■□□□□ 0.21
CLDN6P56747 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN6P56747 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN6P56747 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN6P56747 UXT-AS1-201ENST00000590504 1525 ntBASIC16.39■□□□□ 0.21
CLDN6P56747 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN6P56747 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN6P56747 REXO1L11P-201ENST00000620964 1927 ntBASIC16.39■□□□□ 0.21
CLDN6P56747 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN6P56747 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN6P56747 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN6P56747 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN6P56747 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN6P56747 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN6P56747 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN6P56747 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN6P56747 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CLDN6P56747 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN6P56747 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN6P56747 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN6P56747 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN6P56747 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN6P56747 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN6P56747 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN6P56747 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN6P56747 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN6P56747 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
CLDN6P56747 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDN6P56747 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
CLDN6P56747 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.38■□□□□ 0.21
CLDN6P56747 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.38■□□□□ 0.21
CLDN6P56747 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN6P56747 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN6P56747 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN6P56747 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN6P56747 AC026150.2-201ENST00000564693 1156 ntBASIC16.38■□□□□ 0.21
CLDN6P56747 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN6P56747 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN6P56747 AP001059.3-201ENST00000619053 235 ntBASIC16.38■□□□□ 0.21
CLDN6P56747 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CLDN6P56747 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN6P56747 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN6P56747 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
CLDN6P56747 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN6P56747 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CLDN6P56747 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN6P56747 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN6P56747 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN6P56747 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CLDN6P56747 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN6P56747 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN6P56747 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN6P56747 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN6P56747 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN6P56747 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN6P56747 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN6P56747 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN6P56747 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN6P56747 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.37■□□□□ 0.21
CLDN6P56747 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN6P56747 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.37■□□□□ 0.21
CLDN6P56747 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN6P56747 RARRES2P8-201ENST00000566335 367 ntBASIC16.37■□□□□ 0.21
CLDN6P56747 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN6P56747 AC008761.3-201ENST00000624803 892 ntBASIC16.37■□□□□ 0.21
CLDN6P56747 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN6P56747 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 AC129492.6-201ENST00000611383 1305 ntBASIC16.37■□□□□ 0.21
CLDN6P56747 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN6P56747 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN6P56747 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms