Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUBP1P53384 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUBP1P53384 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUBP1P53384 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NUBP1P53384 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17■□□□□ 0.31
NUBP1P53384 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUBP1P53384 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17■□□□□ 0.31
NUBP1P53384 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17■□□□□ 0.31
NUBP1P53384 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NUBP1P53384 H3F3A-203ENST00000366815 1088 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUBP1P53384 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUBP1P53384 BOLA2P3-201ENST00000404566 256 ntBASIC17■□□□□ 0.31
NUBP1P53384 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17■□□□□ 0.31
NUBP1P53384 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17■□□□□ 0.31
NUBP1P53384 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC17■□□□□ 0.31
NUBP1P53384 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17■□□□□ 0.31
NUBP1P53384 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUBP1P53384 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17■□□□□ 0.31
NUBP1P53384 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17■□□□□ 0.31
NUBP1P53384 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUBP1P53384 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NUBP1P53384 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17■□□□□ 0.31
NUBP1P53384 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17■□□□□ 0.31
NUBP1P53384 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NUBP1P53384 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC17■□□□□ 0.31
NUBP1P53384 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NUBP1P53384 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NUBP1P53384 AC097065.2-201ENST00000608159 533 ntBASIC17■□□□□ 0.31
NUBP1P53384 AC003101.2-201ENST00000612557 442 ntBASIC17■□□□□ 0.31
NUBP1P53384 MIR6787-201ENST00000616675 61 ntBASIC17■□□□□ 0.31
NUBP1P53384 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NUBP1P53384 AC112907.3-201ENST00000577781 2400 ntBASIC17■□□□□ 0.31
NUBP1P53384 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NUBP1P53384 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NUBP1P53384 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NUBP1P53384 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUBP1P53384 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17■□□□□ 0.31
NUBP1P53384 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUBP1P53384 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.99■□□□□ 0.31
NUBP1P53384 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NUBP1P53384 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.99■□□□□ 0.31
NUBP1P53384 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NUBP1P53384 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NUBP1P53384 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.99■□□□□ 0.31
NUBP1P53384 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUBP1P53384 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUBP1P53384 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.99■□□□□ 0.31
NUBP1P53384 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
NUBP1P53384 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.99■□□□□ 0.31
NUBP1P53384 AC234783.1-201ENST00000441761 496 ntBASIC16.99■□□□□ 0.31
NUBP1P53384 KRT223P-202ENST00000449164 1292 ntBASIC16.99■□□□□ 0.31
NUBP1P53384 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC16.99■□□□□ 0.31
NUBP1P53384 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.99■□□□□ 0.31
NUBP1P53384 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.99■□□□□ 0.31
NUBP1P53384 AL512343.1-201ENST00000605837 169 ntBASIC16.99■□□□□ 0.31
NUBP1P53384 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.99■□□□□ 0.31
NUBP1P53384 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.99■□□□□ 0.31
NUBP1P53384 AL035563.1-201ENST00000609087 1539 ntBASIC16.99■□□□□ 0.31
NUBP1P53384 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NUBP1P53384 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NUBP1P53384 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.99■□□□□ 0.31
NUBP1P53384 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NUBP1P53384 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NUBP1P53384 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.99■□□□□ 0.31
NUBP1P53384 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUBP1P53384 AC100803.2-201ENST00000562459 1963 ntBASIC16.98■□□□□ 0.31
NUBP1P53384 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUBP1P53384 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUBP1P53384 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NUBP1P53384 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.98■□□□□ 0.31
NUBP1P53384 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUBP1P53384 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUBP1P53384 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUBP1P53384 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUBP1P53384 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUBP1P53384 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NUBP1P53384 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUBP1P53384 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.98■□□□□ 0.31
NUBP1P53384 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC16.98■□□□□ 0.31
NUBP1P53384 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.98■□□□□ 0.31
NUBP1P53384 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.98■□□□□ 0.31
NUBP1P53384 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.98■□□□□ 0.31
NUBP1P53384 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.98■□□□□ 0.31
NUBP1P53384 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.98■□□□□ 0.31
NUBP1P53384 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUBP1P53384 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUBP1P53384 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUBP1P53384 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUBP1P53384 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.98■□□□□ 0.31
NUBP1P53384 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUBP1P53384 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUBP1P53384 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NUBP1P53384 MFSD8-213ENST00000641134 1327 ntBASIC16.97■□□□□ 0.31
NUBP1P53384 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUBP1P53384 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NUBP1P53384 PHGDH-209ENST00000641074 1780 ntBASIC16.97■□□□□ 0.31
NUBP1P53384 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NUBP1P53384 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NUBP1P53384 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUBP1P53384 OR4B1-201ENST00000309562 930 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms