Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AL591424.1-201ENST00000442569 1213 ntBASIC16.49■□□□□ 0.23
RAB28P51157 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB28P51157 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB28P51157 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB28P51157 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB28P51157 AC027601.4-201ENST00000611259 610 ntBASIC16.49■□□□□ 0.23
RAB28P51157 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB28P51157 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RAB28P51157 AC106820.2-201ENST00000563775 3264 ntBASIC16.49■□□□□ 0.23
RAB28P51157 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
RAB28P51157 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB28P51157 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB28P51157 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.48■□□□□ 0.23
RAB28P51157 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB28P51157 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RAB28P51157 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB28P51157 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB28P51157 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB28P51157 AC129492.6-201ENST00000611383 1305 ntBASIC16.48■□□□□ 0.23
RAB28P51157 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
RAB28P51157 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB28P51157 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB28P51157 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB28P51157 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RAB28P51157 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RAB28P51157 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RAB28P51157 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB28P51157 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB28P51157 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB28P51157 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RAB28P51157 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RAB28P51157 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RAB28P51157 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
RAB28P51157 MED15P5-201ENST00000423150 992 ntBASIC16.48■□□□□ 0.23
RAB28P51157 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RAB28P51157 PMS2P1-201ENST00000431037 1228 ntBASIC16.48■□□□□ 0.23
RAB28P51157 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB28P51157 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RAB28P51157 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB28P51157 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.48■□□□□ 0.23
RAB28P51157 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.48■□□□□ 0.23
RAB28P51157 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB28P51157 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.48■□□□□ 0.23
RAB28P51157 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB28P51157 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB28P51157 FAM197Y3-203ENST00000618346 717 ntBASIC16.48■□□□□ 0.23
RAB28P51157 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB28P51157 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB28P51157 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB28P51157 AL021920.2-201ENST00000624828 1351 ntBASIC16.48■□□□□ 0.23
RAB28P51157 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB28P51157 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB28P51157 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB28P51157 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB28P51157 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RAB28P51157 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
RAB28P51157 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB28P51157 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB28P51157 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RAB28P51157 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RAB28P51157 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.47■□□□□ 0.23
RAB28P51157 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.47■□□□□ 0.23
RAB28P51157 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB28P51157 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB28P51157 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RAB28P51157 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB28P51157 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.47■□□□□ 0.23
RAB28P51157 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB28P51157 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAB28P51157 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB28P51157 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB28P51157 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAB28P51157 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RAB28P51157 HCG4B-203ENST00000450128 991 ntBASIC16.47■□□□□ 0.23
RAB28P51157 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.47■□□□□ 0.23
RAB28P51157 KRT18P58-201ENST00000527480 1120 ntBASIC16.47■□□□□ 0.23
RAB28P51157 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.47■□□□□ 0.23
RAB28P51157 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.47■□□□□ 0.23
RAB28P51157 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.47■□□□□ 0.23
RAB28P51157 DUX4L17-201ENST00000557360 1267 ntBASIC16.47■□□□□ 0.23
RAB28P51157 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB28P51157 AC064836.3-201ENST00000607928 673 ntBASIC16.47■□□□□ 0.23
RAB28P51157 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.47■□□□□ 0.23
RAB28P51157 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB28P51157 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RAB28P51157 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
RAB28P51157 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB28P51157 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms