Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT6CP48668 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
KRT6CP48668 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT6CP48668 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT6CP48668 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT6CP48668 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
KRT6CP48668 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 SIGLEC30P-201ENST00000455569 941 ntBASIC16.63■□□□□ 0.25
KRT6CP48668 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KRT6CP48668 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.63■□□□□ 0.25
KRT6CP48668 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT6CP48668 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT6CP48668 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KRT6CP48668 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
KRT6CP48668 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT6CP48668 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT6CP48668 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 PMPCAP1-201ENST00000508114 1576 ntBASIC16.63■□□□□ 0.25
KRT6CP48668 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT6CP48668 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6CP48668 AGGF1P2-201ENST00000426656 2106 ntBASIC16.63■□□□□ 0.25
KRT6CP48668 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
KRT6CP48668 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
KRT6CP48668 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT6CP48668 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.62■□□□□ 0.25
KRT6CP48668 AC092068.3-201ENST00000587894 2016 ntBASIC16.62■□□□□ 0.25
KRT6CP48668 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT6CP48668 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
KRT6CP48668 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT6CP48668 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.62■□□□□ 0.25
KRT6CP48668 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
KRT6CP48668 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
KRT6CP48668 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.62■□□□□ 0.25
KRT6CP48668 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 AP000867.3-201ENST00000524675 377 ntBASIC16.62■□□□□ 0.25
KRT6CP48668 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT6CP48668 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.62■□□□□ 0.25
KRT6CP48668 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
KRT6CP48668 AC092329.2-201ENST00000598402 547 ntBASIC16.62■□□□□ 0.25
KRT6CP48668 AC069148.1-201ENST00000608741 768 ntBASIC16.62■□□□□ 0.25
KRT6CP48668 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.62■□□□□ 0.25
KRT6CP48668 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.62■□□□□ 0.25
KRT6CP48668 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KRT6CP48668 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6CP48668 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6CP48668 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6CP48668 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT6CP48668 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6CP48668 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
KRT6CP48668 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT6CP48668 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT6CP48668 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6CP48668 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT6CP48668 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT6CP48668 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms