Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.69■□□□□ 0.1
RFC3P40938 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
RFC3P40938 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RFC3P40938 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.69■□□□□ 0.1
RFC3P40938 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RFC3P40938 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
RFC3P40938 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.69■□□□□ 0.1
RFC3P40938 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC3P40938 AL590787.1-201ENST00000568856 1315 ntBASIC15.68■□□□□ 0.1
RFC3P40938 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFC3P40938 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.68■□□□□ 0.1
RFC3P40938 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC3P40938 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RFC3P40938 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC3P40938 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC3P40938 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC3P40938 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC3P40938 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
RFC3P40938 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC3P40938 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC3P40938 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC3P40938 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFC3P40938 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC3P40938 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC3P40938 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC3P40938 ACTG1P4-201ENST00000425123 1122 ntBASIC15.68■□□□□ 0.1
RFC3P40938 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFC3P40938 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.68■□□□□ 0.1
RFC3P40938 PRSS29P-201ENST00000440800 595 ntBASIC15.68■□□□□ 0.1
RFC3P40938 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.68■□□□□ 0.1
RFC3P40938 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC3P40938 AC010654.1-201ENST00000615722 808 ntBASIC15.68■□□□□ 0.1
RFC3P40938 LINC01451-201ENST00000623792 534 ntBASIC15.68■□□□□ 0.1
RFC3P40938 AC010507.1-201ENST00000633895 436 ntBASIC15.68■□□□□ 0.1
RFC3P40938 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC3P40938 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
RFC3P40938 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.68■□□□□ 0.1
RFC3P40938 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC3P40938 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC3P40938 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC3P40938 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC3P40938 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC3P40938 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.67■□□□□ 0.1
RFC3P40938 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
RFC3P40938 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RFC3P40938 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFC3P40938 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFC3P40938 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC3P40938 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC3P40938 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC3P40938 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC3P40938 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC3P40938 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC3P40938 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.67■□□□□ 0.1
RFC3P40938 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RFC3P40938 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC3P40938 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.67■□□□□ 0.1
RFC3P40938 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.67■□□□□ 0.1
RFC3P40938 AC092183.1-201ENST00000469884 875 ntBASIC15.67■□□□□ 0.1
RFC3P40938 ALG1L5P-201ENST00000482043 771 ntBASIC15.67■□□□□ 0.1
RFC3P40938 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.67■□□□□ 0.1
RFC3P40938 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC3P40938 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.67■□□□□ 0.1
RFC3P40938 OR7E47P-204ENST00000575924 449 ntBASIC15.67■□□□□ 0.1
RFC3P40938 MTDHP5-201ENST00000598980 586 ntBASIC15.67■□□□□ 0.1
RFC3P40938 AL078644.1-201ENST00000609881 752 ntBASIC15.67■□□□□ 0.1
RFC3P40938 AC134684.3-201ENST00000641758 218 ntBASIC15.67■□□□□ 0.1
RFC3P40938 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC3P40938 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC3P40938 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RFC3P40938 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC3P40938 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RFC3P40938 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC3P40938 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.67■□□□□ 0.1
RFC3P40938 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC3P40938 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFC3P40938 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.67■□□□□ 0.1
RFC3P40938 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.67■□□□□ 0.1
RFC3P40938 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RFC3P40938 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.67■□□□□ 0.1
RFC3P40938 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC3P40938 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.66■□□□□ 0.1
RFC3P40938 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFC3P40938 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFC3P40938 AL513477.1-201ENST00000602865 2407 ntBASIC15.66■□□□□ 0.1
RFC3P40938 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
RFC3P40938 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC3P40938 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.66■□□□□ 0.1
RFC3P40938 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
RFC3P40938 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC3P40938 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RFC3P40938 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms