Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
ITGA4P13612 RPSAP43-201ENST00000402237 625 ntBASIC18.79■□□□□ 0.6
ITGA4P13612 GPX1P2-201ENST00000429271 606 ntBASIC18.79■□□□□ 0.6
ITGA4P13612 HCG4B-203ENST00000450128 991 ntBASIC18.79■□□□□ 0.6
ITGA4P13612 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.79■□□□□ 0.6
ITGA4P13612 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA4P13612 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.79■□□□□ 0.6
ITGA4P13612 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA4P13612 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.79■□□□□ 0.6
ITGA4P13612 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.79■□□□□ 0.6
ITGA4P13612 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.79■□□□□ 0.6
ITGA4P13612 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ITGA4P13612 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA4P13612 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA4P13612 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.79■□□□□ 0.6
ITGA4P13612 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.79■□□□□ 0.6
ITGA4P13612 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA4P13612 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
ITGA4P13612 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ITGA4P13612 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ITGA4P13612 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.78■□□□□ 0.6
ITGA4P13612 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.78■□□□□ 0.6
ITGA4P13612 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.78■□□□□ 0.6
ITGA4P13612 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.78■□□□□ 0.6
ITGA4P13612 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.78■□□□□ 0.6
ITGA4P13612 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 AC112482.1-201ENST00000492080 688 ntBASIC18.78■□□□□ 0.6
ITGA4P13612 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.78■□□□□ 0.6
ITGA4P13612 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 AC010654.1-201ENST00000615722 808 ntBASIC18.78■□□□□ 0.6
ITGA4P13612 AC055717.3-201ENST00000622967 595 ntBASIC18.78■□□□□ 0.6
ITGA4P13612 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.78■□□□□ 0.6
ITGA4P13612 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
ITGA4P13612 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
ITGA4P13612 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ITGA4P13612 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ITGA4P13612 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA4P13612 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ITGA4P13612 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.77■□□□□ 0.6
ITGA4P13612 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA4P13612 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA4P13612 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA4P13612 AL590787.1-201ENST00000568856 1315 ntBASIC18.77■□□□□ 0.6
ITGA4P13612 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA4P13612 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.77■□□□□ 0.6
ITGA4P13612 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA4P13612 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA4P13612 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.77■□□□□ 0.6
ITGA4P13612 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA4P13612 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA4P13612 AC133963.1-201ENST00000504166 1679 ntBASIC18.77■□□□□ 0.6
ITGA4P13612 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ITGA4P13612 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA4P13612 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.6
ITGA4P13612 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.77■□□□□ 0.6
ITGA4P13612 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.77■□□□□ 0.6
ITGA4P13612 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.77■□□□□ 0.6
ITGA4P13612 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.77■□□□□ 0.6
ITGA4P13612 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.77■□□□□ 0.6
ITGA4P13612 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.77■□□□□ 0.6
ITGA4P13612 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.77■□□□□ 0.6
ITGA4P13612 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.77■□□□□ 0.6
ITGA4P13612 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.77■□□□□ 0.6
ITGA4P13612 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.77■□□□□ 0.6
ITGA4P13612 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.77■□□□□ 0.6
ITGA4P13612 MTDHP5-201ENST00000598980 586 ntBASIC18.77■□□□□ 0.6
ITGA4P13612 AL691403.2-201ENST00000618460 490 ntBASIC18.77■□□□□ 0.6
ITGA4P13612 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA4P13612 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA4P13612 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA4P13612 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA4P13612 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA4P13612 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
ITGA4P13612 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.77■□□□□ 0.6
ITGA4P13612 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ITGA4P13612 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ITGA4P13612 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ITGA4P13612 PI4KAP1-204ENST00000612579 1703 ntBASIC18.77■□□□□ 0.59
ITGA4P13612 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
ITGA4P13612 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ITGA4P13612 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.76■□□□□ 0.59
ITGA4P13612 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ITGA4P13612 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ITGA4P13612 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms