Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
CCL4P13236 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCL4P13236 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL4P13236 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL4P13236 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.05■□□□□ 0.16
CCL4P13236 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL4P13236 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCL4P13236 AC109635.5-201ENST00000533593 962 ntBASIC16.05■□□□□ 0.16
CCL4P13236 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL4P13236 AC026150.2-201ENST00000564693 1156 ntBASIC16.05■□□□□ 0.16
CCL4P13236 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.05■□□□□ 0.16
CCL4P13236 AJ011932.1-201ENST00000621707 465 ntBASIC16.05■□□□□ 0.16
CCL4P13236 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.05■□□□□ 0.16
CCL4P13236 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CCL4P13236 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCL4P13236 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL4P13236 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCL4P13236 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL4P13236 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CCL4P13236 EGFEM1P-202ENST00000431685 1563 ntBASIC16.04■□□□□ 0.16
CCL4P13236 AC008677.1-201ENST00000519230 1561 ntBASIC16.04■□□□□ 0.16
CCL4P13236 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL4P13236 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL4P13236 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCL4P13236 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCL4P13236 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL4P13236 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL4P13236 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL4P13236 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCL4P13236 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL4P13236 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL4P13236 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL4P13236 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL4P13236 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL4P13236 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL4P13236 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCL4P13236 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCL4P13236 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL4P13236 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL4P13236 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL4P13236 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.04■□□□□ 0.16
CCL4P13236 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCL4P13236 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL4P13236 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.04■□□□□ 0.16
CCL4P13236 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.04■□□□□ 0.16
CCL4P13236 KRT8P23-201ENST00000560090 1207 ntBASIC16.04■□□□□ 0.16
CCL4P13236 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.04■□□□□ 0.16
CCL4P13236 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
CCL4P13236 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCL4P13236 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL4P13236 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL4P13236 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL4P13236 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL4P13236 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCL4P13236 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.04■□□□□ 0.16
CCL4P13236 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL4P13236 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL4P13236 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL4P13236 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCL4P13236 WASH6P-202ENST00000359512 1437 ntBASIC16.03■□□□□ 0.16
CCL4P13236 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.03■□□□□ 0.16
CCL4P13236 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL4P13236 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCL4P13236 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL4P13236 RNU1-129P-201ENST00000384064 167 ntBASIC16.03■□□□□ 0.16
CCL4P13236 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.03■□□□□ 0.16
CCL4P13236 PMS2P4-201ENST00000412466 1052 ntBASIC16.03■□□□□ 0.16
CCL4P13236 HCG4-201ENST00000418983 998 ntBASIC16.03■□□□□ 0.16
CCL4P13236 AC107890.1-201ENST00000422478 521 ntBASIC16.03■□□□□ 0.16
CCL4P13236 BASP1P1-201ENST00000430708 665 ntBASIC16.03■□□□□ 0.16
CCL4P13236 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.03■□□□□ 0.16
CCL4P13236 SPDYE14P-201ENST00000442619 822 ntBASIC16.03■□□□□ 0.16
CCL4P13236 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.03■□□□□ 0.16
CCL4P13236 AC125807.1-201ENST00000483097 614 ntBASIC16.03■□□□□ 0.16
CCL4P13236 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.03■□□□□ 0.16
CCL4P13236 SLC25A39P2-201ENST00000537614 270 ntBASIC16.03■□□□□ 0.16
CCL4P13236 U1.21-201ENST00000580816 167 ntBASIC16.03■□□□□ 0.16
CCL4P13236 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL4P13236 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCL4P13236 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL4P13236 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCL4P13236 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL4P13236 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms