Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPN1SWP03999 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPN1SWP03999 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPN1SWP03999 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPN1SWP03999 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPN1SWP03999 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPN1SWP03999 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPN1SWP03999 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.02■□□□□ 0.16
OPN1SWP03999 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.02■□□□□ 0.16
OPN1SWP03999 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.02■□□□□ 0.16
OPN1SWP03999 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.02■□□□□ 0.16
OPN1SWP03999 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
OPN1SWP03999 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
OPN1SWP03999 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
OPN1SWP03999 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.02■□□□□ 0.16
OPN1SWP03999 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPN1SWP03999 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
OPN1SWP03999 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
OPN1SWP03999 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.02■□□□□ 0.15
OPN1SWP03999 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
OPN1SWP03999 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.02■□□□□ 0.15
OPN1SWP03999 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.02■□□□□ 0.15
OPN1SWP03999 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
OPN1SWP03999 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
OPN1SWP03999 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
OPN1SWP03999 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
OPN1SWP03999 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
OPN1SWP03999 CICP6-201ENST00000457191 2729 ntBASIC16.02■□□□□ 0.15
OPN1SWP03999 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
OPN1SWP03999 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.01■□□□□ 0.15
OPN1SWP03999 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
OPN1SWP03999 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.01■□□□□ 0.15
OPN1SWP03999 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
OPN1SWP03999 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.01■□□□□ 0.15
OPN1SWP03999 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.01■□□□□ 0.15
OPN1SWP03999 AC132938.5-201ENST00000624980 1813 ntBASIC16.01■□□□□ 0.15
OPN1SWP03999 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
OPN1SWP03999 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
OPN1SWP03999 FRMD8P1-201ENST00000440433 1524 ntBASIC16.01■□□□□ 0.15
OPN1SWP03999 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
OPN1SWP03999 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.01■□□□□ 0.15
OPN1SWP03999 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.01■□□□□ 0.15
OPN1SWP03999 KRT8P26-201ENST00000534154 1276 ntBASIC16.01■□□□□ 0.15
OPN1SWP03999 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.01■□□□□ 0.15
OPN1SWP03999 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.01■□□□□ 0.15
OPN1SWP03999 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
OPN1SWP03999 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.01■□□□□ 0.15
OPN1SWP03999 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
OPN1SWP03999 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
OPN1SWP03999 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
OPN1SWP03999 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
OPN1SWP03999 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.01■□□□□ 0.15
OPN1SWP03999 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
OPN1SWP03999 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
OPN1SWP03999 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
OPN1SWP03999 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
OPN1SWP03999 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
OPN1SWP03999 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
OPN1SWP03999 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16■□□□□ 0.15
OPN1SWP03999 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 PCDHB17P-201ENST00000539533 2393 ntBASIC16■□□□□ 0.15
OPN1SWP03999 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
OPN1SWP03999 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
OPN1SWP03999 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16■□□□□ 0.15
OPN1SWP03999 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16■□□□□ 0.15
OPN1SWP03999 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 RCN1P1-201ENST00000400413 996 ntBASIC16■□□□□ 0.15
OPN1SWP03999 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16■□□□□ 0.15
OPN1SWP03999 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16■□□□□ 0.15
OPN1SWP03999 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16■□□□□ 0.15
OPN1SWP03999 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16■□□□□ 0.15
OPN1SWP03999 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
OPN1SWP03999 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16■□□□□ 0.15
OPN1SWP03999 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
OPN1SWP03999 LINC01238-205ENST00000567549 1107 ntBASIC16■□□□□ 0.15
OPN1SWP03999 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16■□□□□ 0.15
OPN1SWP03999 AP005901.3-202ENST00000581653 237 ntBASIC16■□□□□ 0.15
OPN1SWP03999 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16■□□□□ 0.15
OPN1SWP03999 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
OPN1SWP03999 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16■□□□□ 0.15
OPN1SWP03999 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
OPN1SWP03999 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16■□□□□ 0.15
OPN1SWP03999 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
OPN1SWP03999 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16■□□□□ 0.15
OPN1SWP03999 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms