Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
MBD3O95983 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3O95983 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.65■□□□□ 0.74
MBD3O95983 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
MBD3O95983 AC007967.3-201ENST00000434308 558 ntBASIC19.65■□□□□ 0.74
MBD3O95983 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.65■□□□□ 0.74
MBD3O95983 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.65■□□□□ 0.74
MBD3O95983 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3O95983 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.65■□□□□ 0.74
MBD3O95983 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3O95983 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
MBD3O95983 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3O95983 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3O95983 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
MBD3O95983 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3O95983 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.65■□□□□ 0.74
MBD3O95983 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.65■□□□□ 0.74
MBD3O95983 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.65■□□□□ 0.74
MBD3O95983 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
MBD3O95983 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3O95983 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
MBD3O95983 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.65■□□□□ 0.74
MBD3O95983 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MBD3O95983 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MBD3O95983 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3O95983 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3O95983 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3O95983 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3O95983 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.64■□□□□ 0.73
MBD3O95983 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.64■□□□□ 0.73
MBD3O95983 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.64■□□□□ 0.73
MBD3O95983 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.64■□□□□ 0.73
MBD3O95983 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.64■□□□□ 0.73
MBD3O95983 STK25P1-201ENST00000585406 838 ntBASIC19.64■□□□□ 0.73
MBD3O95983 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.64■□□□□ 0.73
MBD3O95983 GPR32P1-201ENST00000601788 811 ntBASIC19.64■□□□□ 0.73
MBD3O95983 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.64■□□□□ 0.73
MBD3O95983 AC141257.4-201ENST00000634557 245 ntBASIC19.64■□□□□ 0.73
MBD3O95983 AC136944.6-201ENST00000634818 245 ntBASIC19.64■□□□□ 0.73
MBD3O95983 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3O95983 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3O95983 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.64■□□□□ 0.73
MBD3O95983 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.64■□□□□ 0.73
MBD3O95983 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3O95983 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
MBD3O95983 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.64■□□□□ 0.73
MBD3O95983 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3O95983 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3O95983 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.64■□□□□ 0.73
MBD3O95983 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
MBD3O95983 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3O95983 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3O95983 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3O95983 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
MBD3O95983 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3O95983 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3O95983 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3O95983 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MBD3O95983 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3O95983 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
MBD3O95983 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3O95983 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.63■□□□□ 0.73
MBD3O95983 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3O95983 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.63■□□□□ 0.73
MBD3O95983 AL135999.2-201ENST00000622438 1686 ntBASIC19.63■□□□□ 0.73
MBD3O95983 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3O95983 AL049757.1-201ENST00000616842 1596 ntBASIC19.63■□□□□ 0.73
MBD3O95983 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
MBD3O95983 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.63■□□□□ 0.73
MBD3O95983 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3O95983 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
MBD3O95983 AC122714.2-201ENST00000502787 707 ntBASIC19.63■□□□□ 0.73
MBD3O95983 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.63■□□□□ 0.73
MBD3O95983 AL355075.4-201ENST00000554988 638 ntBASIC19.63■□□□□ 0.73
MBD3O95983 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MBD3O95983 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
MBD3O95983 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.63■□□□□ 0.73
MBD3O95983 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3O95983 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3O95983 HYMAI-201ENST00000635591 3347 ntBASIC19.63■□□□□ 0.73
MBD3O95983 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.63■□□□□ 0.73
MBD3O95983 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3O95983 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3O95983 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.63■□□□□ 0.73
MBD3O95983 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.63■□□□□ 0.73
MBD3O95983 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.63■□□□□ 0.73
MBD3O95983 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
MBD3O95983 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.62■□□□□ 0.73
MBD3O95983 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.62■□□□□ 0.73
MBD3O95983 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
MBD3O95983 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.62■□□□□ 0.73
MBD3O95983 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3O95983 FAM8A6P-201ENST00000407496 1135 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms