Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.87□□□□□ -0.35
SNAI2O43623 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC12.87□□□□□ -0.35
SNAI2O43623 AL139327.4-201ENST00000612362 153 ntBASIC12.87□□□□□ -0.35
SNAI2O43623 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.87□□□□□ -0.35
SNAI2O43623 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SNAI2O43623 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.87□□□□□ -0.35
SNAI2O43623 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SNAI2O43623 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 LINC02012-201ENST00000608206 1725 ntBASIC12.87□□□□□ -0.35
SNAI2O43623 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.87□□□□□ -0.35
SNAI2O43623 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.87□□□□□ -0.35
SNAI2O43623 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.87□□□□□ -0.35
SNAI2O43623 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SNAI2O43623 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.87□□□□□ -0.35
SNAI2O43623 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.87□□□□□ -0.35
SNAI2O43623 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SNAI2O43623 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SNAI2O43623 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.86□□□□□ -0.35
SNAI2O43623 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SNAI2O43623 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SNAI2O43623 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.86□□□□□ -0.35
SNAI2O43623 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SNAI2O43623 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SNAI2O43623 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SNAI2O43623 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC12.86□□□□□ -0.35
SNAI2O43623 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.86□□□□□ -0.35
SNAI2O43623 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.86□□□□□ -0.35
SNAI2O43623 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.86□□□□□ -0.35
SNAI2O43623 AC142381.4-202ENST00000563973 229 ntBASIC12.86□□□□□ -0.35
SNAI2O43623 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.86□□□□□ -0.35
SNAI2O43623 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.86□□□□□ -0.35
SNAI2O43623 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.86□□□□□ -0.35
SNAI2O43623 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.86□□□□□ -0.35
SNAI2O43623 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.86□□□□□ -0.35
SNAI2O43623 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SNAI2O43623 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.86□□□□□ -0.35
SNAI2O43623 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.86□□□□□ -0.35
SNAI2O43623 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.86□□□□□ -0.35
SNAI2O43623 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SNAI2O43623 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
SNAI2O43623 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNAI2O43623 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
SNAI2O43623 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.85□□□□□ -0.35
SNAI2O43623 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SNAI2O43623 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SNAI2O43623 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SNAI2O43623 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SNAI2O43623 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNAI2O43623 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms