Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 LYSMD4-203ENST00000378904 2122 ntBASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 VN2R19P-201ENST00000442399 1052 ntBASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 MTDHP5-201ENST00000598980 586 ntBASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA2E9PIF3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 PTCHD3P3-201ENST00000403073 906 ntBASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 AC092183.1-201ENST00000469884 875 ntBASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 AC018845.2-201ENST00000568326 409 ntBASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.6■□□□□ 0.09
NPIPA2E9PIF3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 GPR89P-201ENST00000407924 1495 ntBASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 AL805961.1-202ENST00000641562 540 ntBASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.59■□□□□ 0.09
NPIPA2E9PIF3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms