Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 AC010327.4-202ENST00000591484 748 ntBASIC17.77■□□□□ 0.44
SRRM3A6NNA2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 AC148477.8-201ENST00000624298 468 ntBASIC17.77■□□□□ 0.44
SRRM3A6NNA2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 AC008741.2-201ENST00000612792 3115 ntBASIC17.77■□□□□ 0.43
SRRM3A6NNA2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SRRM3A6NNA2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
SRRM3A6NNA2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRRM3A6NNA2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRRM3A6NNA2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRRM3A6NNA2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SRRM3A6NNA2 AC233702.3-201ENST00000578656 1387 ntBASIC17.77■□□□□ 0.43
SRRM3A6NNA2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRRM3A6NNA2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRRM3A6NNA2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRRM3A6NNA2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
SRRM3A6NNA2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRRM3A6NNA2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 LINC00554-201ENST00000564841 3011 ntBASIC17.76■□□□□ 0.43
SRRM3A6NNA2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 AC104640.1-201ENST00000562617 2109 ntBASIC17.76■□□□□ 0.43
SRRM3A6NNA2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 Z69720.1-201ENST00000601483 472 ntBASIC17.76■□□□□ 0.43
SRRM3A6NNA2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 AC078925.2-201ENST00000624013 1973 ntBASIC17.76■□□□□ 0.43
SRRM3A6NNA2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRRM3A6NNA2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 RPSAP43-201ENST00000402237 625 ntBASIC17.75■□□□□ 0.43
SRRM3A6NNA2 AC090616.6-201ENST00000582640 721 ntBASIC17.75■□□□□ 0.43
SRRM3A6NNA2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 AL136038.4-201ENST00000603606 1261 ntBASIC17.75■□□□□ 0.43
SRRM3A6NNA2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
SRRM3A6NNA2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms