Protein–RNA interactions for Protein: Q9Y5U5

TNFRSF18, Tumor necrosis factor receptor superfamily member 18, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18Q9Y5U5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 KRT89P-201ENST00000620027 1478 ntBASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 PCED1CP-201ENST00000419887 785 ntBASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 TSPY12P-201ENST00000421279 868 ntBASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 FAM86EP-206ENST00000510506 987 ntBASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.54□□□□□ -0.4
TNFRSF18Q9Y5U5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 UPK3BP1-201ENST00000428678 509 ntBASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 LINC01311-201ENST00000565162 1445 ntBASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFRSF18Q9Y5U5 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TNFRSF18Q9Y5U5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TNFRSF18Q9Y5U5 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TNFRSF18Q9Y5U5 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
TNFRSF18Q9Y5U5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms