Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AD000864.1-201ENST00000624076 2295 ntBASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 MIR940-201ENST00000401276 94 ntBASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 AL353135.1-201ENST00000606729 504 ntBASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL4A3BPQ9Y5P4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 TERC-201ENST00000602385 541 ntBASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 AC027601.4-201ENST00000611259 610 ntBASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL4A3BPQ9Y5P4 PKD1P1-201ENST00000458669 6805 ntBASIC19.14■□□□□ 0.66
COL4A3BPQ9Y5P4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL4A3BPQ9Y5P4 AL121761.2-201ENST00000598007 1648 ntBASIC19.14■□□□□ 0.66
COL4A3BPQ9Y5P4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL4A3BPQ9Y5P4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL4A3BPQ9Y5P4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL4A3BPQ9Y5P4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 MED15P5-201ENST00000423150 992 ntBASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 AC108751.1-201ENST00000490852 363 ntBASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 AC140113.2-201ENST00000604370 208 ntBASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 LINC02012-201ENST00000608206 1725 ntBASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A3BPQ9Y5P4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms