Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 CROCCP2-202ENST00000412962 2773 ntBASIC16.55■□□□□ 0.24
PCDHGA6Q9Y5G7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 AL020989.1-201ENST00000422979 469 ntBASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 AC002347.1-201ENST00000569543 541 ntBASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 MIR3687-2-201ENST00000577708 61 ntBASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 AL139424.1-201ENST00000607572 797 ntBASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 MIR3687-1-201ENST00000614492 61 ntBASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA6Q9Y5G7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 AC055717.3-201ENST00000622967 595 ntBASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA6Q9Y5G7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms