Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 AL671277.1-201ENST00000429656 993 ntBASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC32.29■■■□□ 2.76
SHROOM4Q9ULL8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 RBPMS2P1-201ENST00000437762 623 ntBASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 IGHV3-42-201ENST00000520410 361 ntBASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC32.28■■■□□ 2.76
SHROOM4Q9ULL8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
SHROOM4Q9ULL8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SHROOM4Q9ULL8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC32.27■■■□□ 2.76
SHROOM4Q9ULL8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SHROOM4Q9ULL8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SHROOM4Q9ULL8 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
SHROOM4Q9ULL8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC32.27■■■□□ 2.76
SHROOM4Q9ULL8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SHROOM4Q9ULL8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC32.27■■■□□ 2.76
SHROOM4Q9ULL8 PPP6R2P1-201ENST00000450880 1275 ntBASIC32.27■■■□□ 2.76
SHROOM4Q9ULL8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC32.27■■■□□ 2.76
SHROOM4Q9ULL8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
SHROOM4Q9ULL8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SHROOM4Q9ULL8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
SHROOM4Q9ULL8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SHROOM4Q9ULL8 AC008677.1-201ENST00000519230 1561 ntBASIC32.27■■■□□ 2.76
SHROOM4Q9ULL8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC32.26■■■□□ 2.76
SHROOM4Q9ULL8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
SHROOM4Q9ULL8 NOC2LP1-202ENST00000452600 2235 ntBASIC32.26■■■□□ 2.76
SHROOM4Q9ULL8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC32.26■■■□□ 2.75
SHROOM4Q9ULL8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC32.26■■■□□ 2.75
SHROOM4Q9ULL8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC32.26■■■□□ 2.75
SHROOM4Q9ULL8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
SHROOM4Q9ULL8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
SHROOM4Q9ULL8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
SHROOM4Q9ULL8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
SHROOM4Q9ULL8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.75
SHROOM4Q9ULL8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
SHROOM4Q9ULL8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SHROOM4Q9ULL8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC32.25■■■□□ 2.75
SHROOM4Q9ULL8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC32.25■■■□□ 2.75
SHROOM4Q9ULL8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC32.25■■■□□ 2.75
SHROOM4Q9ULL8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SHROOM4Q9ULL8 SLC25A1P3-201ENST00000395415 828 ntBASIC32.25■■■□□ 2.75
SHROOM4Q9ULL8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC32.25■■■□□ 2.75
SHROOM4Q9ULL8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
SHROOM4Q9ULL8 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC32.25■■■□□ 2.75
SHROOM4Q9ULL8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SHROOM4Q9ULL8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SHROOM4Q9ULL8 AC129492.6-201ENST00000611383 1305 ntBASIC32.25■■■□□ 2.75
SHROOM4Q9ULL8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SHROOM4Q9ULL8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SHROOM4Q9ULL8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC32.25■■■□□ 2.75
SHROOM4Q9ULL8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC32.24■■■□□ 2.75
SHROOM4Q9ULL8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC32.24■■■□□ 2.75
SHROOM4Q9ULL8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
SHROOM4Q9ULL8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SHROOM4Q9ULL8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
SHROOM4Q9ULL8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SHROOM4Q9ULL8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SHROOM4Q9ULL8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
SHROOM4Q9ULL8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SHROOM4Q9ULL8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
SHROOM4Q9ULL8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC32.23■■■□□ 2.75
SHROOM4Q9ULL8 GPR53P-205ENST00000457298 1084 ntBASIC32.23■■■□□ 2.75
SHROOM4Q9ULL8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC32.23■■■□□ 2.75
SHROOM4Q9ULL8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC32.23■■■□□ 2.75
SHROOM4Q9ULL8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms