Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.32■□□□□ 0.84
CLIP2Q9UDT6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 GPR89P-201ENST00000407924 1495 ntBASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 IGHV3-65-201ENST00000523210 341 ntBASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 AC092865.5-201ENST00000545435 363 ntBASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 AC008667.4-201ENST00000607370 168 ntBASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
CLIP2Q9UDT6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 KRT18P13-201ENST00000400056 1290 ntBASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 AC108073.2-201ENST00000464002 357 ntBASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 GPALPP1-207ENST00000611650 899 ntBASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 AC006538.3-201ENST00000612495 578 ntBASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 AC004790.2-201ENST00000623588 572 ntBASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIP2Q9UDT6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms