Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 NUS1P2-201ENST00000417358 873 ntBASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC68Q9H2F9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 LINC02012-201ENST00000608206 1725 ntBASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 AC132938.5-201ENST00000624980 1813 ntBASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC68Q9H2F9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC68Q9H2F9 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CCDC68Q9H2F9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CCDC68Q9H2F9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC68Q9H2F9 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC68Q9H2F9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms