Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 AC004817.3-201ENST00000602957 2129 ntBASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
UPF3BQ9BZI7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.87
UPF3BQ9BZI7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 SPDYE21P-201ENST00000413323 827 ntBASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 AC138894.3-201ENST00000603787 634 ntBASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
UPF3BQ9BZI7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 GPR89P-201ENST00000407924 1495 ntBASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 MIR5100-201ENST00000579544 119 ntBASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 PCDHB17P-201ENST00000539533 2393 ntBASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF3BQ9BZI7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF3BQ9BZI7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms