Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 CRYGEP-201ENST00000412192 528 ntBASIC17.64■□□□□ 0.41
RPRD1AQ96P16 PMS2P1-201ENST00000431037 1228 ntBASIC17.64■□□□□ 0.41
RPRD1AQ96P16 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 AC007967.2-201ENST00000432613 625 ntBASIC17.64■□□□□ 0.41
RPRD1AQ96P16 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 PAWRP1-201ENST00000451083 565 ntBASIC17.64■□□□□ 0.41
RPRD1AQ96P16 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 KRT18P58-201ENST00000527480 1120 ntBASIC17.64■□□□□ 0.41
RPRD1AQ96P16 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RPRD1AQ96P16 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 MED15P5-201ENST00000423150 992 ntBASIC17.63■□□□□ 0.41
RPRD1AQ96P16 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 PRSS29P-201ENST00000440800 595 ntBASIC17.63■□□□□ 0.41
RPRD1AQ96P16 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.63■□□□□ 0.41
RPRD1AQ96P16 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 AC140113.2-201ENST00000604370 208 ntBASIC17.63■□□□□ 0.41
RPRD1AQ96P16 AC027601.4-201ENST00000611259 610 ntBASIC17.63■□□□□ 0.41
RPRD1AQ96P16 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPRD1AQ96P16 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 LINC02012-201ENST00000608206 1725 ntBASIC17.62■□□□□ 0.41
RPRD1AQ96P16 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 VN2R19P-201ENST00000442399 1052 ntBASIC17.62■□□□□ 0.41
RPRD1AQ96P16 AC087163.2-201ENST00000457299 853 ntBASIC17.62■□□□□ 0.41
RPRD1AQ96P16 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 AL671883.3-201ENST00000603274 991 ntBASIC17.62■□□□□ 0.41
RPRD1AQ96P16 AC010654.1-201ENST00000615722 808 ntBASIC17.62■□□□□ 0.41
RPRD1AQ96P16 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPRD1AQ96P16 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.61■□□□□ 0.41
RPRD1AQ96P16 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.61■□□□□ 0.41
RPRD1AQ96P16 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPRD1AQ96P16 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms