Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.22■□□□□ 0.19
TM9SF4Q92544 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TM9SF4Q92544 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.22■□□□□ 0.19
TM9SF4Q92544 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.22■□□□□ 0.19
TM9SF4Q92544 AC004832.2-201ENST00000426397 482 ntBASIC16.22■□□□□ 0.19
TM9SF4Q92544 AC009947.1-201ENST00000444350 727 ntBASIC16.22■□□□□ 0.19
TM9SF4Q92544 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.22■□□□□ 0.19
TM9SF4Q92544 DUTP2-201ENST00000519164 463 ntBASIC16.22■□□□□ 0.19
TM9SF4Q92544 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
TM9SF4Q92544 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.22■□□□□ 0.19
TM9SF4Q92544 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.22■□□□□ 0.19
TM9SF4Q92544 MTDHP5-201ENST00000598980 586 ntBASIC16.22■□□□□ 0.19
TM9SF4Q92544 AC116407.2-201ENST00000613639 860 ntBASIC16.22■□□□□ 0.19
TM9SF4Q92544 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 AC073592.5-201ENST00000624854 528 ntBASIC16.22■□□□□ 0.19
TM9SF4Q92544 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.22■□□□□ 0.19
TM9SF4Q92544 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TM9SF4Q92544 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.22■□□□□ 0.19
TM9SF4Q92544 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM9SF4Q92544 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
TM9SF4Q92544 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TM9SF4Q92544 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TM9SF4Q92544 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.21■□□□□ 0.19
TM9SF4Q92544 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.21■□□□□ 0.19
TM9SF4Q92544 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.21■□□□□ 0.19
TM9SF4Q92544 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.21■□□□□ 0.19
TM9SF4Q92544 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TM9SF4Q92544 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.21■□□□□ 0.19
TM9SF4Q92544 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.21■□□□□ 0.19
TM9SF4Q92544 COX5BP2-201ENST00000392354 334 ntBASIC16.21■□□□□ 0.19
TM9SF4Q92544 RPSAP43-201ENST00000402237 625 ntBASIC16.21■□□□□ 0.19
TM9SF4Q92544 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.21■□□□□ 0.19
TM9SF4Q92544 AC007967.2-201ENST00000432613 625 ntBASIC16.21■□□□□ 0.19
TM9SF4Q92544 AC108751.1-201ENST00000490852 363 ntBASIC16.21■□□□□ 0.19
TM9SF4Q92544 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TM9SF4Q92544 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.21■□□□□ 0.19
TM9SF4Q92544 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TM9SF4Q92544 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
TM9SF4Q92544 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM9SF4Q92544 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
TM9SF4Q92544 AC010460.3-201ENST00000511359 1579 ntBASIC16.21■□□□□ 0.18
TM9SF4Q92544 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
TM9SF4Q92544 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TM9SF4Q92544 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TM9SF4Q92544 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TM9SF4Q92544 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM9SF4Q92544 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM9SF4Q92544 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
TM9SF4Q92544 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM9SF4Q92544 AC093010.1-201ENST00000473625 1624 ntBASIC16.2■□□□□ 0.18
TM9SF4Q92544 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM9SF4Q92544 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.2■□□□□ 0.18
TM9SF4Q92544 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM9SF4Q92544 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TM9SF4Q92544 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM9SF4Q92544 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.2■□□□□ 0.18
TM9SF4Q92544 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
TM9SF4Q92544 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM9SF4Q92544 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.2■□□□□ 0.18
TM9SF4Q92544 KRT18P27-201ENST00000427733 1299 ntBASIC16.2■□□□□ 0.18
TM9SF4Q92544 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.2■□□□□ 0.18
TM9SF4Q92544 AC004967.1-201ENST00000453589 447 ntBASIC16.2■□□□□ 0.18
TM9SF4Q92544 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM9SF4Q92544 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.2■□□□□ 0.18
TM9SF4Q92544 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.2■□□□□ 0.18
TM9SF4Q92544 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.2■□□□□ 0.18
TM9SF4Q92544 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.2■□□□□ 0.18
TM9SF4Q92544 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
TM9SF4Q92544 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms