Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 AL513523.2-202ENST00000427283 2040 ntBASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 AL139327.4-201ENST00000612362 153 ntBASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 AC092119.3-201ENST00000612618 583 ntBASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB40AQ8WXH6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 AC022188.1-201ENST00000620960 1664 ntBASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 AC092068.3-201ENST00000587894 2016 ntBASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 IGHGP-201ENST00000390555 1178 ntBASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 AC090616.6-201ENST00000582640 721 ntBASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 AL390719.2-201ENST00000606993 987 ntBASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 KRT18P1-202ENST00000452408 1331 ntBASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms