Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.38■□□□□ 0.53
BEST2Q8NFU1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
BEST2Q8NFU1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST2Q8NFU1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
BEST2Q8NFU1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.38■□□□□ 0.53
BEST2Q8NFU1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
BEST2Q8NFU1 PP12613-201ENST00000424958 2230 ntBASIC18.38■□□□□ 0.53
BEST2Q8NFU1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.38■□□□□ 0.53
BEST2Q8NFU1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST2Q8NFU1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BEST2Q8NFU1 AL023806.1-201ENST00000603994 1649 ntBASIC18.38■□□□□ 0.53
BEST2Q8NFU1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 RHOQP3-201ENST00000437982 621 ntBASIC18.37■□□□□ 0.53
BEST2Q8NFU1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 AC007064.4-201ENST00000637740 555 ntBASIC18.37■□□□□ 0.53
BEST2Q8NFU1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 LINC02012-201ENST00000608206 1725 ntBASIC18.37■□□□□ 0.53
BEST2Q8NFU1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST2Q8NFU1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.36■□□□□ 0.53
BEST2Q8NFU1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 DNAJB3-201ENST00000446806 729 ntBASIC18.36■□□□□ 0.53
BEST2Q8NFU1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 BCAR1-209ENST00000546196 1340 ntBASIC18.36■□□□□ 0.53
BEST2Q8NFU1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 AC023141.13-201ENST00000604991 943 ntBASIC18.36■□□□□ 0.53
BEST2Q8NFU1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 AC055717.3-201ENST00000622967 595 ntBASIC18.36■□□□□ 0.53
BEST2Q8NFU1 AC004877.2-201ENST00000623941 599 ntBASIC18.36■□□□□ 0.53
BEST2Q8NFU1 AC141586.5-201ENST00000624546 2050 ntBASIC18.36■□□□□ 0.53
BEST2Q8NFU1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BEST2Q8NFU1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 AC112482.1-201ENST00000492080 688 ntBASIC18.35■□□□□ 0.53
BEST2Q8NFU1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 AC107918.2-201ENST00000530817 355 ntBASIC18.35■□□□□ 0.53
BEST2Q8NFU1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.35■□□□□ 0.53
BEST2Q8NFU1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms