Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 LINC02012-201ENST00000608206 1725 ntBASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 AC092053.1-201ENST00000605787 1936 ntBASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 FZD10-202ENST00000539839 3282 ntBASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC60Q8IWA6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 AC139713.2-201ENST00000641328 2723 ntBASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 AC005412.3-201ENST00000580309 715 ntBASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 MIR4515-201ENST00000584082 81 ntBASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 AL596442.2-201ENST00000610240 980 ntBASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 AL645728.2-201ENST00000641974 660 ntBASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC60Q8IWA6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 TOP3BP1-201ENST00000420768 1380 ntBASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 SLC22A20-204ENST00000530038 1673 ntBASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 HMGA1P7-201ENST00000406908 502 ntBASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.93■□□□□ 0.62
CCDC60Q8IWA6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms