Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 TFAMP1-201ENST00000412727 736 ntBASIC21.49■■□□□ 1.03
COPS6Q7L5N1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 AC243562.1-201ENST00000560672 389 ntBASIC21.49■■□□□ 1.03
COPS6Q7L5N1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 AL009183.1-201ENST00000603760 355 ntBASIC21.49■■□□□ 1.03
COPS6Q7L5N1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COPS6Q7L5N1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 HLA-J-203ENST00000494367 1087 ntBASIC21.48■■□□□ 1.03
COPS6Q7L5N1 AC109322.1-201ENST00000524499 1264 ntBASIC21.48■■□□□ 1.03
COPS6Q7L5N1 FAM86C2P-203ENST00000528684 1004 ntBASIC21.48■■□□□ 1.03
COPS6Q7L5N1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
COPS6Q7L5N1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COPS6Q7L5N1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
COPS6Q7L5N1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.47■■□□□ 1.03
COPS6Q7L5N1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
COPS6Q7L5N1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
COPS6Q7L5N1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.47■■□□□ 1.03
COPS6Q7L5N1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.47■■□□□ 1.03
COPS6Q7L5N1 SPDYE11-202ENST00000450699 704 ntBASIC21.47■■□□□ 1.03
COPS6Q7L5N1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.47■■□□□ 1.03
COPS6Q7L5N1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
COPS6Q7L5N1 AC079140.1-201ENST00000508039 487 ntBASIC21.47■■□□□ 1.03
COPS6Q7L5N1 SPDYE9P-201ENST00000570642 692 ntBASIC21.47■■□□□ 1.03
COPS6Q7L5N1 SPDYE10P-202ENST00000612005 668 ntBASIC21.47■■□□□ 1.03
COPS6Q7L5N1 SPDYE8P-202ENST00000612377 668 ntBASIC21.47■■□□□ 1.03
COPS6Q7L5N1 AC106028.4-201ENST00000614509 607 ntBASIC21.47■■□□□ 1.03
COPS6Q7L5N1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COPS6Q7L5N1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COPS6Q7L5N1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.47■■□□□ 1.03
COPS6Q7L5N1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
COPS6Q7L5N1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COPS6Q7L5N1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
COPS6Q7L5N1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 HCG4-201ENST00000418983 998 ntBASIC21.46■■□□□ 1.03
COPS6Q7L5N1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.46■■□□□ 1.03
COPS6Q7L5N1 AC092474.2-201ENST00000424288 719 ntBASIC21.46■■□□□ 1.03
COPS6Q7L5N1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms