Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC4Q6S5L8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SHC4Q6S5L8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
SHC4Q6S5L8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC4Q6S5L8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHC4Q6S5L8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC4Q6S5L8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SHC4Q6S5L8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC4Q6S5L8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHC4Q6S5L8 AC079328.2-201ENST00000561241 3354 ntBASIC19.3■□□□□ 0.68
SHC4Q6S5L8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 TUBB8P12-201ENST00000308911 1335 ntBASIC19.3■□□□□ 0.68
SHC4Q6S5L8 TUBB7P-202ENST00000428444 1305 ntBASIC19.3■□□□□ 0.68
SHC4Q6S5L8 TUBB8P7-204ENST00000567960 1332 ntBASIC19.3■□□□□ 0.68
SHC4Q6S5L8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 NKAPP1-205ENST00000585790 367 ntBASIC19.3■□□□□ 0.68
SHC4Q6S5L8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 AL391256.1-201ENST00000443260 1855 ntBASIC19.3■□□□□ 0.68
SHC4Q6S5L8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHC4Q6S5L8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 PCDH8P1-201ENST00000428983 2773 ntBASIC19.29■□□□□ 0.68
SHC4Q6S5L8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SHC4Q6S5L8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SHC4Q6S5L8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.28■□□□□ 0.68
SHC4Q6S5L8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC4Q6S5L8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC4Q6S5L8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC4Q6S5L8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
SHC4Q6S5L8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC4Q6S5L8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHC4Q6S5L8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHC4Q6S5L8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC4Q6S5L8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHC4Q6S5L8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC4Q6S5L8 AL662844.4-201ENST00000606367 2838 ntBASIC19.28■□□□□ 0.68
SHC4Q6S5L8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC4Q6S5L8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC4Q6S5L8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHC4Q6S5L8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms