Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
RFWD3Q6PCD5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 MIR574-201ENST00000385209 96 ntBASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 UNC93B6-202ENST00000528242 690 ntBASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 CICP6-201ENST00000457191 2729 ntBASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFWD3Q6PCD5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 AL353135.1-201ENST00000606729 504 ntBASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 AC005593.1-201ENST00000624894 515 ntBASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFWD3Q6PCD5 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 AC011270.2-201ENST00000624293 2550 ntBASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 MIR940-201ENST00000401276 94 ntBASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 AC034105.1-201ENST00000563488 319 ntBASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 AC145285.3-201ENST00000564603 959 ntBASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFWD3Q6PCD5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFWD3Q6PCD5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms