Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H3F3CQ6NXT2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.83■□□□□ 0.12
H3F3CQ6NXT2 AC129492.6-201ENST00000611383 1305 ntBASIC15.83■□□□□ 0.12
H3F3CQ6NXT2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H3F3CQ6NXT2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H3F3CQ6NXT2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
H3F3CQ6NXT2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
H3F3CQ6NXT2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
H3F3CQ6NXT2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.83■□□□□ 0.12
H3F3CQ6NXT2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
H3F3CQ6NXT2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 MKNK2P1-201ENST00000437526 628 ntBASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 AC087163.2-201ENST00000457299 853 ntBASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 KRT19P2-202ENST00000557173 1012 ntBASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 AC067852.2-201ENST00000590513 2313 ntBASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3CQ6NXT2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 SLC25A6P2-201ENST00000497974 877 ntBASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 AC124067.4-201ENST00000519691 2379 ntBASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 BCAR1-209ENST00000546196 1340 ntBASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 AC023141.13-201ENST00000604991 943 ntBASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3CQ6NXT2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 AC016396.2-201ENST00000562575 1417 ntBASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 AC025580.3-201ENST00000617932 1424 ntBASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H3F3CQ6NXT2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms