Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 CSF2RBP1-201ENST00000447905 391 ntBASIC16.43■□□□□ 0.22
RIF1Q5UIP0 RN7SL618P-201ENST00000477850 296 ntBASIC16.43■□□□□ 0.22
RIF1Q5UIP0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 AC010319.3-201ENST00000597028 470 ntBASIC16.43■□□□□ 0.22
RIF1Q5UIP0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 AL021578.1-201ENST00000613646 709 ntBASIC16.43■□□□□ 0.22
RIF1Q5UIP0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RIF1Q5UIP0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 NUS1P3-201ENST00000423502 862 ntBASIC16.42■□□□□ 0.22
RIF1Q5UIP0 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 WFDC1-204ENST00000613603 549 ntBASIC16.42■□□□□ 0.22
RIF1Q5UIP0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 AL035456.1-201ENST00000456064 1369 ntBASIC16.42■□□□□ 0.22
RIF1Q5UIP0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.42■□□□□ 0.22
RIF1Q5UIP0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 FAM21FP-201ENST00000426241 1131 ntBASIC16.42■□□□□ 0.22
RIF1Q5UIP0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 AC253536.4-201ENST00000440539 267 ntBASIC16.42■□□□□ 0.22
RIF1Q5UIP0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 AL079307.3-201ENST00000556114 283 ntBASIC16.42■□□□□ 0.22
RIF1Q5UIP0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 AC073389.1-201ENST00000595595 795 ntBASIC16.42■□□□□ 0.22
RIF1Q5UIP0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RIF1Q5UIP0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RIF1Q5UIP0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RIF1Q5UIP0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RIF1Q5UIP0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.41■□□□□ 0.22
RIF1Q5UIP0 AC104457.1-201ENST00000401024 814 ntBASIC16.41■□□□□ 0.22
RIF1Q5UIP0 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RIF1Q5UIP0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.41■□□□□ 0.22
RIF1Q5UIP0 AC016629.1-201ENST00000596579 586 ntBASIC16.41■□□□□ 0.22
RIF1Q5UIP0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.41■□□□□ 0.22
RIF1Q5UIP0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RIF1Q5UIP0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.41■□□□□ 0.22
RIF1Q5UIP0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RIF1Q5UIP0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.41■□□□□ 0.22
RIF1Q5UIP0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RIF1Q5UIP0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.41■□□□□ 0.22
RIF1Q5UIP0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.41■□□□□ 0.22
RIF1Q5UIP0 AL096828.2-201ENST00000567259 1965 ntBASIC16.41■□□□□ 0.22
RIF1Q5UIP0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms