Protein–RNA interactions for Protein: Q5SZB4

C9orf50, Uncharacterized protein C9orf50, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50Q5SZB4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 AL080243.2-201ENST00000418783 582 ntBASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 SLC7A15P-201ENST00000424028 1363 ntBASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 AC120498.9-201ENST00000339021 3867 ntBASIC18.11■□□□□ 0.49
C9orf50Q5SZB4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 KRT18P55-202ENST00000578578 1546 ntBASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 BCYRN1-201ENST00000418539 200 ntBASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 ZNF890P-202ENST00000530367 1156 ntBASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 CROCCP3-202ENST00000420820 1947 ntBASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C9orf50Q5SZB4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 KRT8P44-201ENST00000441609 1350 ntBASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 ANKRD19P-201ENST00000338192 862 ntBASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 AL079307.3-201ENST00000556114 283 ntBASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 AC091167.2-201ENST00000579581 588 ntBASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 CTBP2P3-201ENST00000585629 1255 ntBASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 AL133215.2-201ENST00000609242 977 ntBASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C9orf50Q5SZB4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms