Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 AL035456.1-201ENST00000456064 1369 ntBASIC14.67□□□□□ -0.06
LRRK2Q5S007 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 REXO1L11P-201ENST00000620964 1927 ntBASIC14.67□□□□□ -0.06
LRRK2Q5S007 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 BOLA2P3-201ENST00000404566 256 ntBASIC14.67□□□□□ -0.06
LRRK2Q5S007 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 RPL7P3-201ENST00000441388 714 ntBASIC14.67□□□□□ -0.06
LRRK2Q5S007 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 RN7SL618P-201ENST00000477850 296 ntBASIC14.67□□□□□ -0.06
LRRK2Q5S007 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LRRK2Q5S007 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRK2Q5S007 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRK2Q5S007 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 MTND6P24-201ENST00000440466 518 ntBASIC14.66□□□□□ -0.06
LRRK2Q5S007 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRK2Q5S007 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.66□□□□□ -0.06
LRRK2Q5S007 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRK2Q5S007 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRK2Q5S007 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRK2Q5S007 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRK2Q5S007 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRK2Q5S007 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRK2Q5S007 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRK2Q5S007 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRK2Q5S007 AC044860.1-202ENST00000559481 777 ntBASIC14.66□□□□□ -0.06
LRRK2Q5S007 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRK2Q5S007 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.66□□□□□ -0.06
LRRK2Q5S007 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRK2Q5S007 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRK2Q5S007 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRK2Q5S007 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
LRRK2Q5S007 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
LRRK2Q5S007 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 MIR1247-201ENST00000408206 136 ntBASIC14.65□□□□□ -0.06
LRRK2Q5S007 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LRRK2Q5S007 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.65□□□□□ -0.06
LRRK2Q5S007 AL079307.3-201ENST00000556114 283 ntBASIC14.65□□□□□ -0.06
LRRK2Q5S007 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.65□□□□□ -0.06
LRRK2Q5S007 AC106872.11-201ENST00000605838 421 ntBASIC14.65□□□□□ -0.06
LRRK2Q5S007 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
LRRK2Q5S007 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 CLDN5-201ENST00000403084 2357 ntBASIC14.65□□□□□ -0.06
LRRK2Q5S007 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.65□□□□□ -0.06
LRRK2Q5S007 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.65□□□□□ -0.06
LRRK2Q5S007 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.65□□□□□ -0.06
LRRK2Q5S007 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LRRK2Q5S007 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
LRRK2Q5S007 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LRRK2Q5S007 AL021578.1-201ENST00000613646 709 ntBASIC14.65□□□□□ -0.06
LRRK2Q5S007 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.65□□□□□ -0.06
LRRK2Q5S007 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.65□□□□□ -0.06
LRRK2Q5S007 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.65□□□□□ -0.06
LRRK2Q5S007 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms