Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 BX276092.7-203ENST00000637198 1536 ntBASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 CHCHD2P3-201ENST00000603038 451 ntBASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 MIR6775-201ENST00000617557 69 ntBASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RSPO4Q2I0M5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 AC093010.1-201ENST00000473625 1624 ntBASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 MYCLP1-201ENST00000372451 1075 ntBASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 BNIP3P42-201ENST00000454982 569 ntBASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 RN7SL837P-201ENST00000463010 287 ntBASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 BNIP3P29-201ENST00000598302 571 ntBASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 AC007967.4-201ENST00000614700 386 ntBASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 AC011447.5-201ENST00000616168 564 ntBASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 AC004840.1-201ENST00000636359 365 ntBASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO4Q2I0M5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
RSPO4Q2I0M5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RSPO4Q2I0M5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
RSPO4Q2I0M5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
RSPO4Q2I0M5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 AC087499.5-201ENST00000452760 1342 ntBASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 AC109635.5-201ENST00000533593 962 ntBASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 AC135586.1-201ENST00000539323 574 ntBASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 MIR6869-201ENST00000619434 62 ntBASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms