Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 AC092329.2-201ENST00000598402 547 ntBASIC16.53■□□□□ 0.24
HMGCS1Q01581 AC099336.1-202ENST00000602961 463 ntBASIC16.53■□□□□ 0.24
HMGCS1Q01581 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 AP000867.4-201ENST00000641616 219 ntBASIC16.53■□□□□ 0.24
HMGCS1Q01581 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HMGCS1Q01581 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGCS1Q01581 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCS1Q01581 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCS1Q01581 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCS1Q01581 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.52■□□□□ 0.24
HMGCS1Q01581 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.52■□□□□ 0.24
HMGCS1Q01581 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCS1Q01581 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.52■□□□□ 0.24
HMGCS1Q01581 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HMGCS1Q01581 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCS1Q01581 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.52■□□□□ 0.24
HMGCS1Q01581 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCS1Q01581 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.52■□□□□ 0.24
HMGCS1Q01581 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.52■□□□□ 0.24
HMGCS1Q01581 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.52■□□□□ 0.24
HMGCS1Q01581 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCS1Q01581 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCS1Q01581 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.52■□□□□ 0.24
HMGCS1Q01581 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.52■□□□□ 0.24
HMGCS1Q01581 AC093458.2-201ENST00000623150 629 ntBASIC16.52■□□□□ 0.24
HMGCS1Q01581 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGCS1Q01581 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
HMGCS1Q01581 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HMGCS1Q01581 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
HMGCS1Q01581 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HMGCS1Q01581 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGCS1Q01581 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
HMGCS1Q01581 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HMGCS1Q01581 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGCS1Q01581 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGCS1Q01581 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HMGCS1Q01581 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HMGCS1Q01581 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGCS1Q01581 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGCS1Q01581 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCS1Q01581 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCS1Q01581 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCS1Q01581 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCS1Q01581 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCS1Q01581 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms