Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 ELK2BP-201ENST00000415014 1224 ntBASIC19.62■□□□□ 0.73
CHMP4BP1P59074 KRT18P27-201ENST00000427733 1299 ntBASIC19.62■□□□□ 0.73
CHMP4BP1P59074 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 AC109462.3-201ENST00000573934 613 ntBASIC19.62■□□□□ 0.73
CHMP4BP1P59074 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 AC132938.5-201ENST00000624980 1813 ntBASIC19.62■□□□□ 0.73
CHMP4BP1P59074 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP4BP1P59074 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 AC009949.1-201ENST00000623048 1830 ntBASIC19.61■□□□□ 0.73
CHMP4BP1P59074 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 AC004967.1-201ENST00000453589 447 ntBASIC19.61■□□□□ 0.73
CHMP4BP1P59074 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 AL596442.2-201ENST00000610240 980 ntBASIC19.61■□□□□ 0.73
CHMP4BP1P59074 AC073592.4-201ENST00000623827 446 ntBASIC19.61■□□□□ 0.73
CHMP4BP1P59074 PGM5P2-202ENST00000637225 1043 ntBASIC19.61■□□□□ 0.73
CHMP4BP1P59074 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP4BP1P59074 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 CRYGEP-201ENST00000412192 528 ntBASIC19.6■□□□□ 0.73
CHMP4BP1P59074 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 DUTP2-201ENST00000519164 463 ntBASIC19.6■□□□□ 0.73
CHMP4BP1P59074 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 AC018845.2-201ENST00000568326 409 ntBASIC19.6■□□□□ 0.73
CHMP4BP1P59074 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 AP001160.2-201ENST00000596071 487 ntBASIC19.6■□□□□ 0.73
CHMP4BP1P59074 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 AC079781.4-201ENST00000641908 219 ntBASIC19.6■□□□□ 0.73
CHMP4BP1P59074 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.6■□□□□ 0.73
CHMP4BP1P59074 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP4BP1P59074 SIGLEC16-201ENST00000599858 1437 ntBASIC19.59■□□□□ 0.73
CHMP4BP1P59074 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms