Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CACNA2D1P54289 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.16■□□□□ 0.5
CACNA2D1P54289 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA2D1P54289 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNA2D1P54289 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 PI4KAP1-204ENST00000612579 1703 ntBASIC18.15■□□□□ 0.5
CACNA2D1P54289 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 IGLL3P-201ENST00000412472 434 ntBASIC18.15■□□□□ 0.5
CACNA2D1P54289 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 MIR4751-201ENST00000578027 74 ntBASIC18.15■□□□□ 0.5
CACNA2D1P54289 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 AC023511.2-201ENST00000618803 211 ntBASIC18.15■□□□□ 0.5
CACNA2D1P54289 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.15■□□□□ 0.5
CACNA2D1P54289 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACNA2D1P54289 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CACNA2D1P54289 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CACNA2D1P54289 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
CACNA2D1P54289 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CACNA2D1P54289 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.14■□□□□ 0.49
CACNA2D1P54289 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.14■□□□□ 0.49
CACNA2D1P54289 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA2D1P54289 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA2D1P54289 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA2D1P54289 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CACNA2D1P54289 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA2D1P54289 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA2D1P54289 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CACNA2D1P54289 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA2D1P54289 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA2D1P54289 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CACNA2D1P54289 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CACNA2D1P54289 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA2D1P54289 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA2D1P54289 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA2D1P54289 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CACNA2D1P54289 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CACNA2D1P54289 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CACNA2D1P54289 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA2D1P54289 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CACNA2D1P54289 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA2D1P54289 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA2D1P54289 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CACNA2D1P54289 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.13■□□□□ 0.49
CACNA2D1P54289 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA2D1P54289 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.13■□□□□ 0.49
CACNA2D1P54289 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA2D1P54289 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA2D1P54289 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA2D1P54289 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA2D1P54289 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA2D1P54289 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA2D1P54289 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.13■□□□□ 0.49
CACNA2D1P54289 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA2D1P54289 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA2D1P54289 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CACNA2D1P54289 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA2D1P54289 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.13■□□□□ 0.49
CACNA2D1P54289 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.13■□□□□ 0.49
CACNA2D1P54289 VN2R19P-201ENST00000442399 1052 ntBASIC18.13■□□□□ 0.49
CACNA2D1P54289 AL591424.1-201ENST00000442569 1213 ntBASIC18.13■□□□□ 0.49
CACNA2D1P54289 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CACNA2D1P54289 HCG4B-203ENST00000450128 991 ntBASIC18.13■□□□□ 0.49
CACNA2D1P54289 PAWRP1-201ENST00000451083 565 ntBASIC18.13■□□□□ 0.49
CACNA2D1P54289 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.13■□□□□ 0.49
CACNA2D1P54289 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.13■□□□□ 0.49
CACNA2D1P54289 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.13■□□□□ 0.49
CACNA2D1P54289 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.13■□□□□ 0.49
CACNA2D1P54289 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.13■□□□□ 0.49
CACNA2D1P54289 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.13■□□□□ 0.49
CACNA2D1P54289 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms