Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.78■□□□□ 0.6
ATN1P54259 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.78■□□□□ 0.6
ATN1P54259 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
ATN1P54259 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATN1P54259 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ATN1P54259 REXO1L11P-201ENST00000620964 1927 ntBASIC18.78■□□□□ 0.6
ATN1P54259 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATN1P54259 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ATN1P54259 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATN1P54259 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.77■□□□□ 0.6
ATN1P54259 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATN1P54259 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATN1P54259 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATN1P54259 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ATN1P54259 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.77■□□□□ 0.6
ATN1P54259 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATN1P54259 MIR346-201ENST00000362234 95 ntBASIC18.77■□□□□ 0.6
ATN1P54259 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ATN1P54259 SPTLC1P1-201ENST00000447199 261 ntBASIC18.77■□□□□ 0.6
ATN1P54259 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.77■□□□□ 0.6
ATN1P54259 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.77■□□□□ 0.6
ATN1P54259 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATN1P54259 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.77■□□□□ 0.6
ATN1P54259 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.77■□□□□ 0.6
ATN1P54259 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.77■□□□□ 0.6
ATN1P54259 AC048344.4-201ENST00000619744 527 ntBASIC18.77■□□□□ 0.6
ATN1P54259 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATN1P54259 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATN1P54259 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATN1P54259 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATN1P54259 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ATN1P54259 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ATN1P54259 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ATN1P54259 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.77■□□□□ 0.59
ATN1P54259 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.77■□□□□ 0.59
ATN1P54259 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.76■□□□□ 0.59
ATN1P54259 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATN1P54259 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATN1P54259 WIZP1-201ENST00000531444 2299 ntBASIC18.76■□□□□ 0.59
ATN1P54259 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATN1P54259 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATN1P54259 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ATN1P54259 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
ATN1P54259 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATN1P54259 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATN1P54259 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.76■□□□□ 0.59
ATN1P54259 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATN1P54259 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATN1P54259 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ATN1P54259 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.76■□□□□ 0.59
ATN1P54259 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC18.76■□□□□ 0.59
ATN1P54259 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATN1P54259 AC104629.1-201ENST00000494226 508 ntBASIC18.76■□□□□ 0.59
ATN1P54259 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.76■□□□□ 0.59
ATN1P54259 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ATN1P54259 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.76■□□□□ 0.59
ATN1P54259 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.76■□□□□ 0.59
ATN1P54259 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATN1P54259 HILS1-202ENST00000545329 423 ntBASIC18.76■□□□□ 0.59
ATN1P54259 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.76■□□□□ 0.59
ATN1P54259 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.76■□□□□ 0.59
ATN1P54259 AL139327.4-201ENST00000612362 153 ntBASIC18.76■□□□□ 0.59
ATN1P54259 AC003101.2-201ENST00000612557 442 ntBASIC18.76■□□□□ 0.59
ATN1P54259 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATN1P54259 SPDYE12P-201ENST00000618416 771 ntBASIC18.76■□□□□ 0.59
ATN1P54259 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATN1P54259 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.76■□□□□ 0.59
ATN1P54259 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.76■□□□□ 0.59
ATN1P54259 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.76■□□□□ 0.59
ATN1P54259 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATN1P54259 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATN1P54259 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.75■□□□□ 0.59
ATN1P54259 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATN1P54259 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.75■□□□□ 0.59
ATN1P54259 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATN1P54259 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ATN1P54259 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ATN1P54259 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATN1P54259 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATN1P54259 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ATN1P54259 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATN1P54259 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATN1P54259 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.75■□□□□ 0.59
ATN1P54259 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATN1P54259 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATN1P54259 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATN1P54259 GPR53P-205ENST00000457298 1084 ntBASIC18.75■□□□□ 0.59
ATN1P54259 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.75■□□□□ 0.59
ATN1P54259 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATN1P54259 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.75■□□□□ 0.59
ATN1P54259 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.75■□□□□ 0.59
ATN1P54259 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.75■□□□□ 0.59
ATN1P54259 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ATN1P54259 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATN1P54259 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATN1P54259 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.75■□□□□ 0.59
ATN1P54259 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.75■□□□□ 0.59
ATN1P54259 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.75■□□□□ 0.59
ATN1P54259 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATN1P54259 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms