Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA2P52926 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
HMGA2P52926 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.63■□□□□ 0.09
HMGA2P52926 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA2P52926 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HMGA2P52926 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA2P52926 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGA2P52926 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA2P52926 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA2P52926 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA2P52926 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.63■□□□□ 0.09
HMGA2P52926 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
HMGA2P52926 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA2P52926 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA2P52926 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.63■□□□□ 0.09
HMGA2P52926 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA2P52926 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGA2P52926 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.63■□□□□ 0.09
HMGA2P52926 AC011498.5-201ENST00000592027 486 ntBASIC15.63■□□□□ 0.09
HMGA2P52926 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA2P52926 AL139011.1-202ENST00000642063 584 ntBASIC15.63■□□□□ 0.09
HMGA2P52926 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGA2P52926 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
HMGA2P52926 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA2P52926 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
HMGA2P52926 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGA2P52926 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA2P52926 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGA2P52926 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA2P52926 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HMGA2P52926 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGA2P52926 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA2P52926 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGA2P52926 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGA2P52926 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HMGA2P52926 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGA2P52926 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.62■□□□□ 0.09
HMGA2P52926 PMPCAP1-201ENST00000508114 1576 ntBASIC15.62■□□□□ 0.09
HMGA2P52926 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
HMGA2P52926 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGA2P52926 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.62■□□□□ 0.09
HMGA2P52926 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGA2P52926 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
HMGA2P52926 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGA2P52926 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
HMGA2P52926 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGA2P52926 AP002414.1-201ENST00000391405 1147 ntBASIC15.62■□□□□ 0.09
HMGA2P52926 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGA2P52926 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.62■□□□□ 0.09
HMGA2P52926 AC092647.4-201ENST00000457211 535 ntBASIC15.62■□□□□ 0.09
HMGA2P52926 AC063952.2-201ENST00000498792 1227 ntBASIC15.62■□□□□ 0.09
HMGA2P52926 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.62■□□□□ 0.09
HMGA2P52926 KRT8P26-201ENST00000534154 1276 ntBASIC15.62■□□□□ 0.09
HMGA2P52926 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.62■□□□□ 0.09
HMGA2P52926 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.62■□□□□ 0.09
HMGA2P52926 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.62■□□□□ 0.09
HMGA2P52926 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGA2P52926 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.62■□□□□ 0.09
HMGA2P52926 AC008741.2-201ENST00000612792 3115 ntBASIC15.62■□□□□ 0.09
HMGA2P52926 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGA2P52926 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGA2P52926 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGA2P52926 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGA2P52926 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGA2P52926 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGA2P52926 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.62■□□□□ 0.09
HMGA2P52926 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HMGA2P52926 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGA2P52926 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
HMGA2P52926 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
HMGA2P52926 AL021920.2-201ENST00000624828 1351 ntBASIC15.62■□□□□ 0.09
HMGA2P52926 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGA2P52926 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HMGA2P52926 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGA2P52926 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGA2P52926 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGA2P52926 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.61■□□□□ 0.09
HMGA2P52926 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGA2P52926 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGA2P52926 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGA2P52926 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.61■□□□□ 0.09
HMGA2P52926 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HMGA2P52926 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGA2P52926 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms