Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC005829.1-201ENST00000570002 483 ntBASIC18.88■□□□□ 0.61
GPC3P51654 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC3P51654 AP001160.2-201ENST00000596071 487 ntBASIC18.88■□□□□ 0.61
GPC3P51654 C20orf181-201ENST00000623918 480 ntBASIC18.88■□□□□ 0.61
GPC3P51654 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
GPC3P51654 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC3P51654 AC025580.3-201ENST00000617932 1424 ntBASIC18.88■□□□□ 0.61
GPC3P51654 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GPC3P51654 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.88■□□□□ 0.61
GPC3P51654 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC3P51654 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GPC3P51654 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
GPC3P51654 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC3P51654 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
GPC3P51654 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC3P51654 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC3P51654 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
GPC3P51654 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.87■□□□□ 0.61
GPC3P51654 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC3P51654 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC3P51654 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC3P51654 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC3P51654 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC3P51654 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GPC3P51654 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC3P51654 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC3P51654 RPS8P6-201ENST00000426177 609 ntBASIC18.87■□□□□ 0.61
GPC3P51654 FAM185BP-201ENST00000443595 716 ntBASIC18.87■□□□□ 0.61
GPC3P51654 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.87■□□□□ 0.61
GPC3P51654 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC3P51654 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GPC3P51654 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
GPC3P51654 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.87■□□□□ 0.61
GPC3P51654 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.87■□□□□ 0.61
GPC3P51654 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC3P51654 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GPC3P51654 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GPC3P51654 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC3P51654 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC3P51654 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC3P51654 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.86■□□□□ 0.61
GPC3P51654 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GPC3P51654 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC3P51654 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GPC3P51654 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC3P51654 AC211486.1-202ENST00000416371 468 ntBASIC18.86■□□□□ 0.61
GPC3P51654 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
GPC3P51654 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.86■□□□□ 0.61
GPC3P51654 AC211476.1-201ENST00000503899 468 ntBASIC18.86■□□□□ 0.61
GPC3P51654 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.86■□□□□ 0.61
GPC3P51654 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.86■□□□□ 0.61
GPC3P51654 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.86■□□□□ 0.61
GPC3P51654 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.86■□□□□ 0.61
GPC3P51654 AC023141.13-201ENST00000604991 943 ntBASIC18.86■□□□□ 0.61
GPC3P51654 ACTL9-202ENST00000612068 1252 ntBASIC18.86■□□□□ 0.61
GPC3P51654 AC007064.4-201ENST00000637740 555 ntBASIC18.86■□□□□ 0.61
GPC3P51654 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC3P51654 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
GPC3P51654 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC3P51654 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.86■□□□□ 0.61
GPC3P51654 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC3P51654 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GPC3P51654 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC3P51654 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC3P51654 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC3P51654 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.85■□□□□ 0.61
GPC3P51654 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
GPC3P51654 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.85■□□□□ 0.61
GPC3P51654 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.85■□□□□ 0.61
GPC3P51654 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.85■□□□□ 0.61
GPC3P51654 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.85■□□□□ 0.61
GPC3P51654 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.85■□□□□ 0.61
GPC3P51654 HTR5BP-201ENST00000430851 1154 ntBASIC18.85■□□□□ 0.61
GPC3P51654 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
GPC3P51654 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.85■□□□□ 0.61
GPC3P51654 MIR4469-201ENST00000583919 79 ntBASIC18.85■□□□□ 0.61
GPC3P51654 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.85■□□□□ 0.61
GPC3P51654 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.85■□□□□ 0.61
GPC3P51654 AL078644.1-201ENST00000609881 752 ntBASIC18.85■□□□□ 0.61
GPC3P51654 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.85■□□□□ 0.61
GPC3P51654 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
GPC3P51654 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
GPC3P51654 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC3P51654 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.85■□□□□ 0.61
GPC3P51654 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.85■□□□□ 0.61
GPC3P51654 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms