Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.47■□□□□ 0.71
CNGA1P29973 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.47■□□□□ 0.71
CNGA1P29973 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CNGA1P29973 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 AC002056.1-201ENST00000395613 760 ntBASIC19.47■□□□□ 0.71
CNGA1P29973 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.47■□□□□ 0.71
CNGA1P29973 AL627223.1-201ENST00000416693 442 ntBASIC19.47■□□□□ 0.71
CNGA1P29973 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.47■□□□□ 0.71
CNGA1P29973 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.47■□□□□ 0.71
CNGA1P29973 AC026120.1-201ENST00000611536 926 ntBASIC19.47■□□□□ 0.71
CNGA1P29973 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CNGA1P29973 AC068880.1-201ENST00000507289 2297 ntBASIC19.47■□□□□ 0.71
CNGA1P29973 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.47■□□□□ 0.71
CNGA1P29973 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.47■□□□□ 0.71
CNGA1P29973 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.47■□□□□ 0.71
CNGA1P29973 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CNGA1P29973 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNGA1P29973 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNGA1P29973 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNGA1P29973 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.46■□□□□ 0.71
CNGA1P29973 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.46■□□□□ 0.71
CNGA1P29973 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNGA1P29973 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNGA1P29973 FZD10-202ENST00000539839 3282 ntBASIC19.46■□□□□ 0.71
CNGA1P29973 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNGA1P29973 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.46■□□□□ 0.71
CNGA1P29973 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.46■□□□□ 0.71
CNGA1P29973 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CNGA1P29973 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNGA1P29973 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNGA1P29973 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNGA1P29973 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CNGA1P29973 AL671277.1-201ENST00000429656 993 ntBASIC19.46■□□□□ 0.71
CNGA1P29973 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.46■□□□□ 0.71
CNGA1P29973 SPDYE11-202ENST00000450699 704 ntBASIC19.46■□□□□ 0.71
CNGA1P29973 INGX-202ENST00000489074 768 ntBASIC19.46■□□□□ 0.71
CNGA1P29973 AC067863.1-201ENST00000494933 530 ntBASIC19.46■□□□□ 0.71
CNGA1P29973 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.46■□□□□ 0.71
CNGA1P29973 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.46■□□□□ 0.71
CNGA1P29973 AC190387.1-201ENST00000551683 408 ntBASIC19.46■□□□□ 0.71
CNGA1P29973 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.46■□□□□ 0.71
CNGA1P29973 SPDYE9P-201ENST00000570642 692 ntBASIC19.46■□□□□ 0.71
CNGA1P29973 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
CNGA1P29973 SPDYE10P-202ENST00000612005 668 ntBASIC19.46■□□□□ 0.71
CNGA1P29973 ACTL9-202ENST00000612068 1252 ntBASIC19.46■□□□□ 0.71
CNGA1P29973 SPDYE8P-202ENST00000612377 668 ntBASIC19.46■□□□□ 0.71
CNGA1P29973 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.46■□□□□ 0.71
CNGA1P29973 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CNGA1P29973 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNGA1P29973 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNGA1P29973 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNGA1P29973 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CNGA1P29973 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNGA1P29973 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.45■□□□□ 0.7
CNGA1P29973 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.45■□□□□ 0.7
CNGA1P29973 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
CNGA1P29973 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CNGA1P29973 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNGA1P29973 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNGA1P29973 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNGA1P29973 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CNGA1P29973 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CNGA1P29973 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNGA1P29973 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNGA1P29973 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNGA1P29973 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNGA1P29973 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.45■□□□□ 0.7
CNGA1P29973 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.45■□□□□ 0.7
CNGA1P29973 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CNGA1P29973 PMS2P4-201ENST00000412466 1052 ntBASIC19.45■□□□□ 0.7
CNGA1P29973 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.45■□□□□ 0.7
CNGA1P29973 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.45■□□□□ 0.7
CNGA1P29973 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.45■□□□□ 0.7
CNGA1P29973 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.45■□□□□ 0.7
CNGA1P29973 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.45■□□□□ 0.7
CNGA1P29973 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.45■□□□□ 0.7
CNGA1P29973 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNGA1P29973 AL390955.2-201ENST00000603032 514 ntBASIC19.45■□□□□ 0.7
CNGA1P29973 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNGA1P29973 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNGA1P29973 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNGA1P29973 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNGA1P29973 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CNGA1P29973 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNGA1P29973 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNGA1P29973 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNGA1P29973 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNGA1P29973 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms