Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.8■□□□□ 0.12
NKX2-2O95096 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.8■□□□□ 0.12
NKX2-2O95096 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-2O95096 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.8■□□□□ 0.12
NKX2-2O95096 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NKX2-2O95096 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.79■□□□□ 0.12
NKX2-2O95096 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NKX2-2O95096 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX2-2O95096 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.79■□□□□ 0.12
NKX2-2O95096 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NKX2-2O95096 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.79■□□□□ 0.12
NKX2-2O95096 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
NKX2-2O95096 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NKX2-2O95096 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX2-2O95096 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NKX2-2O95096 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX2-2O95096 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
NKX2-2O95096 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX2-2O95096 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX2-2O95096 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NKX2-2O95096 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NKX2-2O95096 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.79■□□□□ 0.12
NKX2-2O95096 HNRNPDP1-201ENST00000439535 754 ntBASIC15.79■□□□□ 0.12
NKX2-2O95096 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.79■□□□□ 0.12
NKX2-2O95096 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.79■□□□□ 0.12
NKX2-2O95096 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.79■□□□□ 0.12
NKX2-2O95096 AP002490.2-201ENST00000524791 560 ntBASIC15.79■□□□□ 0.12
NKX2-2O95096 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.79■□□□□ 0.12
NKX2-2O95096 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.79■□□□□ 0.12
NKX2-2O95096 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.79■□□□□ 0.12
NKX2-2O95096 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NKX2-2O95096 AC104692.2-201ENST00000603054 253 ntBASIC15.79■□□□□ 0.12
NKX2-2O95096 AL031008.1-201ENST00000619963 541 ntBASIC15.79■□□□□ 0.12
NKX2-2O95096 AC008735.5-201ENST00000623544 497 ntBASIC15.79■□□□□ 0.12
NKX2-2O95096 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.79■□□□□ 0.12
NKX2-2O95096 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NKX2-2O95096 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NKX2-2O95096 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.79■□□□□ 0.12
NKX2-2O95096 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.79■□□□□ 0.12
NKX2-2O95096 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX2-2O95096 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX2-2O95096 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NKX2-2O95096 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NKX2-2O95096 AC011676.5-201ENST00000624864 2660 ntBASIC15.79■□□□□ 0.12
NKX2-2O95096 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX2-2O95096 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX2-2O95096 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.78■□□□□ 0.12
NKX2-2O95096 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
NKX2-2O95096 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.78■□□□□ 0.12
NKX2-2O95096 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 PCDHB17P-201ENST00000539533 2393 ntBASIC15.78■□□□□ 0.12
NKX2-2O95096 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.78■□□□□ 0.12
NKX2-2O95096 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
NKX2-2O95096 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.78■□□□□ 0.12
NKX2-2O95096 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NKX2-2O95096 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NKX2-2O95096 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.78■□□□□ 0.12
NKX2-2O95096 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.78■□□□□ 0.12
NKX2-2O95096 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.78■□□□□ 0.12
NKX2-2O95096 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.78■□□□□ 0.12
NKX2-2O95096 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.78■□□□□ 0.12
NKX2-2O95096 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.78■□□□□ 0.12
NKX2-2O95096 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.78■□□□□ 0.12
NKX2-2O95096 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.78■□□□□ 0.12
NKX2-2O95096 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.78■□□□□ 0.12
NKX2-2O95096 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.78■□□□□ 0.12
NKX2-2O95096 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.78■□□□□ 0.12
NKX2-2O95096 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NKX2-2O95096 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.78■□□□□ 0.12
NKX2-2O95096 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.78■□□□□ 0.12
NKX2-2O95096 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NKX2-2O95096 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NKX2-2O95096 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.78■□□□□ 0.12
NKX2-2O95096 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
NKX2-2O95096 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX2-2O95096 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NKX2-2O95096 KRT8P49-201ENST00000604166 1432 ntBASIC15.77■□□□□ 0.12
NKX2-2O95096 AGGF1P2-201ENST00000426656 2106 ntBASIC15.77■□□□□ 0.12
NKX2-2O95096 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NKX2-2O95096 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
NKX2-2O95096 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
NKX2-2O95096 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms