Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLSTN1O94985 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLSTN1O94985 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.03■□□□□ 0.64
CLSTN1O94985 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLSTN1O94985 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLSTN1O94985 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLSTN1O94985 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CLSTN1O94985 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLSTN1O94985 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.02■□□□□ 0.64
CLSTN1O94985 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLSTN1O94985 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.02■□□□□ 0.64
CLSTN1O94985 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLSTN1O94985 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLSTN1O94985 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLSTN1O94985 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CLSTN1O94985 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLSTN1O94985 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLSTN1O94985 RCN1P2-201ENST00000398357 915 ntBASIC19.02■□□□□ 0.64
CLSTN1O94985 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CLSTN1O94985 IGHV3-52-201ENST00000519770 353 ntBASIC19.02■□□□□ 0.64
CLSTN1O94985 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.02■□□□□ 0.64
CLSTN1O94985 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.02■□□□□ 0.64
CLSTN1O94985 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.02■□□□□ 0.64
CLSTN1O94985 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.02■□□□□ 0.64
CLSTN1O94985 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.02■□□□□ 0.64
CLSTN1O94985 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CLSTN1O94985 AL591684.3-201ENST00000605187 298 ntBASIC19.02■□□□□ 0.64
CLSTN1O94985 AL353801.3-201ENST00000609898 542 ntBASIC19.02■□□□□ 0.64
CLSTN1O94985 AC114341.1-201ENST00000618070 349 ntBASIC19.02■□□□□ 0.64
CLSTN1O94985 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC19.02■□□□□ 0.64
CLSTN1O94985 AL365209.1-201ENST00000624418 6473 ntBASIC19.02■□□□□ 0.64
CLSTN1O94985 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CLSTN1O94985 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLSTN1O94985 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.02■□□□□ 0.64
CLSTN1O94985 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC19.02■□□□□ 0.64
CLSTN1O94985 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.02■□□□□ 0.63
CLSTN1O94985 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.02■□□□□ 0.63
CLSTN1O94985 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLSTN1O94985 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.02■□□□□ 0.63
CLSTN1O94985 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CLSTN1O94985 AC012313.1-201ENST00000593393 3059 ntBASIC19.02■□□□□ 0.63
CLSTN1O94985 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CLSTN1O94985 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLSTN1O94985 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLSTN1O94985 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CLSTN1O94985 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLSTN1O94985 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLSTN1O94985 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLSTN1O94985 AC096633.1-201ENST00000422446 749 ntBASIC19.01■□□□□ 0.63
CLSTN1O94985 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.01■□□□□ 0.63
CLSTN1O94985 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLSTN1O94985 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.01■□□□□ 0.63
CLSTN1O94985 AC091304.2-201ENST00000564639 760 ntBASIC19.01■□□□□ 0.63
CLSTN1O94985 AC111152.3-201ENST00000569699 673 ntBASIC19.01■□□□□ 0.63
CLSTN1O94985 AC109462.3-201ENST00000573934 613 ntBASIC19.01■□□□□ 0.63
CLSTN1O94985 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLSTN1O94985 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLSTN1O94985 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLSTN1O94985 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLSTN1O94985 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLSTN1O94985 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CLSTN1O94985 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.01■□□□□ 0.63
CLSTN1O94985 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLSTN1O94985 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLSTN1O94985 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.01■□□□□ 0.63
CLSTN1O94985 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CLSTN1O94985 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLSTN1O94985 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLSTN1O94985 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19■□□□□ 0.63
CLSTN1O94985 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLSTN1O94985 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CLSTN1O94985 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLSTN1O94985 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLSTN1O94985 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 PP12613-201ENST00000424958 2230 ntBASIC19■□□□□ 0.63
CLSTN1O94985 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CLSTN1O94985 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19■□□□□ 0.63
CLSTN1O94985 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19■□□□□ 0.63
CLSTN1O94985 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19■□□□□ 0.63
CLSTN1O94985 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19■□□□□ 0.63
CLSTN1O94985 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19■□□□□ 0.63
CLSTN1O94985 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLSTN1O94985 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLSTN1O94985 TNRC18P3-201ENST00000441896 2691 ntBASIC19■□□□□ 0.63
CLSTN1O94985 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CLSTN1O94985 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms