Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP1O94782 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USP1O94782 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USP1O94782 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP1O94782 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.39■□□□□ 0.37
USP1O94782 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP1O94782 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USP1O94782 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.39■□□□□ 0.37
USP1O94782 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.39■□□□□ 0.37
USP1O94782 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USP1O94782 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP1O94782 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP1O94782 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
USP1O94782 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP1O94782 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.38■□□□□ 0.37
USP1O94782 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP1O94782 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP1O94782 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP1O94782 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP1O94782 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP1O94782 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
USP1O94782 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.38■□□□□ 0.37
USP1O94782 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.38■□□□□ 0.37
USP1O94782 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP1O94782 MINOS1P3-201ENST00000457048 203 ntBASIC17.38■□□□□ 0.37
USP1O94782 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.38■□□□□ 0.37
USP1O94782 TOB2P1-201ENST00000469761 992 ntBASIC17.38■□□□□ 0.37
USP1O94782 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.38■□□□□ 0.37
USP1O94782 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP1O94782 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP1O94782 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP1O94782 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.38■□□□□ 0.37
USP1O94782 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
USP1O94782 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP1O94782 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP1O94782 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP1O94782 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
USP1O94782 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
USP1O94782 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.37■□□□□ 0.37
USP1O94782 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 NSUN5P1-202ENST00000421140 1535 ntBASIC17.37■□□□□ 0.37
USP1O94782 NSUN5P2-203ENST00000457352 1529 ntBASIC17.37■□□□□ 0.37
USP1O94782 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
USP1O94782 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.37■□□□□ 0.37
USP1O94782 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.37■□□□□ 0.37
USP1O94782 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
USP1O94782 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.37■□□□□ 0.37
USP1O94782 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.37■□□□□ 0.37
USP1O94782 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 AC092068.3-201ENST00000587894 2016 ntBASIC17.37■□□□□ 0.37
USP1O94782 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
USP1O94782 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.37■□□□□ 0.37
USP1O94782 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
USP1O94782 IGHV3-47-201ENST00000425060 335 ntBASIC17.37■□□□□ 0.37
USP1O94782 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
USP1O94782 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
USP1O94782 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.37■□□□□ 0.37
USP1O94782 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.37■□□□□ 0.37
USP1O94782 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
USP1O94782 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
USP1O94782 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
USP1O94782 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
USP1O94782 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.37■□□□□ 0.37
USP1O94782 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.37■□□□□ 0.37
USP1O94782 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.37■□□□□ 0.37
USP1O94782 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
USP1O94782 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP1O94782 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
USP1O94782 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
USP1O94782 PMPCAP1-201ENST00000508114 1576 ntBASIC17.36■□□□□ 0.37
USP1O94782 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.36■□□□□ 0.37
USP1O94782 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.36■□□□□ 0.37
USP1O94782 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.36■□□□□ 0.37
USP1O94782 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.36■□□□□ 0.37
USP1O94782 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.36■□□□□ 0.37
USP1O94782 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP1O94782 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.36■□□□□ 0.37
USP1O94782 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms